Detailed information NTG0110006

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABXS94_RS07630
• Genome accession: NZ_AP031566
• Coordinates: 1605441..1606064 (-)
• Length: 207 a.a.
• NCBI ID: WP_225555734.1
• Uniprot ID: A0AB35M0Y6
• Organism: Acinetobacter towneri strain PT23-B2
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1600441..1611064

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXS94_RS07600 (PT23B2_14740)	-	1600744..1601175 (-)	432	WP_019836521.1	SRPBCC family protein	-
ABXS94_RS07605 (PT23B2_14750)	tadA	1601241..1601768 (-)	528	WP_353674953.1	tRNA adenosine(34) deaminase TadA	-
ABXS94_RS07610 (PT23B2_14760)	-	1601796..1602917 (-)	1122	WP_004976784.1	enoyl-CoA hydratase/isomerase family protein	-
ABXS94_RS07615 (PT23B2_14770)	ung	1602914..1603627 (-)	714	WP_096901164.1	uracil-DNA glycosylase	-
ABXS94_RS07620 (PT23B2_14780)	-	1603665..1604261 (-)	597	WP_104851897.1	6-carboxytetrahydropterin synthase	-
ABXS94_RS07625 (PT23B2_14790)	gspK	1604444..1605427 (-)	984	WP_180169114.1	type II secretion system minor pseudopilin GspK	-
ABXS94_RS07630 (PT23B2_14800)	xcpW	1605441..1606064 (-)	624	WP_225555734.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABXS94_RS07635 (PT23B2_14810)	xcpV	1606067..1606441 (-)	375	WP_353674954.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABXS94_RS07640 (PT23B2_14820)	-	1606431..1606982 (-)	552	WP_004976794.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
ABXS94_RS07645 (PT23B2_14830)	-	1606989..1607603 (-)	615	WP_004976797.1	TetR/AcrR family transcriptional regulator	-
ABXS94_RS07650 (PT23B2_14840)	-	1607697..1608470 (-)	774	WP_004976800.1	TatD family hydrolase	-
ABXS94_RS07655 (PT23B2_14850)	-	1608495..1608836 (-)	342	WP_026438361.1	PilZ domain-containing protein	-
ABXS94_RS07660 (PT23B2_14860)	-	1608847..1609836 (-)	990	WP_286417460.1	DNA polymerase III subunit delta' C-terminal domain-containing protein	-
ABXS94_RS07665 (PT23B2_14870)	kdsB	1609851..1610612 (-)	762	WP_353674955.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 207 a.a.
• Molecular weight: 23868.28 Da
• Isoelectric Point: 6.2606

>NTDB_id=110006 ABXS94_RS07630 WP_225555734.1 1605441..1606064(-) (xcpW) [Acinetobacter towneri strain PT23-B2]
MSAKKGFTLVELLVAIAIFAVLSALGWKVFDYLAKVKDRNAMHEANLEQLQESYQQILRDTMQAVPLTANVKGQQQPALV
LQNGRFNFSKTGVTDPLQQGISPHERVEYQYRADEKKLYRLKYRNLHQTGNDQPESSVMLDEVEAFEIMVLNPNELSSWP
ESNIDPQQTEQLRLLPKGIKINLTVRDVQYEWIFSLLQTDFLKKKDN

Nucleotide

• Length: 624 bp

>NTDB_id=110006 ABXS94_RS07630 WP_225555734.1 1605441..1606064(-) (xcpW) [Acinetobacter towneri strain PT23-B2]
ATGAGTGCAAAGAAAGGCTTTACTTTGGTTGAGTTATTGGTCGCGATTGCAATTTTTGCAGTGCTGTCTGCTTTGGGTTG
GAAAGTATTTGATTATCTCGCCAAAGTCAAAGATCGCAATGCGATGCATGAAGCCAATCTAGAACAGTTGCAAGAAAGCT
ATCAACAAATATTACGTGACACGATGCAGGCTGTTCCATTAACGGCCAATGTCAAAGGGCAGCAACAACCTGCTTTGGTT
TTACAAAATGGACGTTTTAATTTCAGTAAAACTGGTGTGACCGATCCCTTGCAGCAGGGTATTTCACCCCATGAGCGTGT
TGAATATCAATATCGTGCCGATGAAAAAAAATTGTATCGTTTAAAATATCGTAATTTGCATCAAACGGGCAATGATCAGC
CTGAGTCGAGCGTGATGTTGGATGAAGTTGAAGCCTTTGAGATTATGGTATTGAATCCAAATGAATTAAGTAGTTGGCCT
GAAAGCAATATTGATCCTCAGCAAACTGAACAATTAAGGCTACTCCCGAAAGGAATAAAAATAAATTTAACCGTGCGTGA
CGTGCAATACGAATGGATATTTAGCTTATTGCAGACTGATTTTTTAAAGAAGAAAGACAATTAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (59-193)

• Prokaryotic N-terminal methylation motif (N_methyl) (1-25)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	62.189	97.101	0.604