Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   ABXS94_RS03950 Genome accession   NZ_AP031566
Coordinates   855787..860361 (+) Length   1524 a.a.
NCBI ID   WP_353675579.1    Uniprot ID   -
Organism   Acinetobacter towneri strain PT23-B2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 850787..865361
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABXS94_RS03925 (PT23B2_07610) - 851250..851894 (-) 645 WP_004975522.1 hypothetical protein -
  ABXS94_RS03930 (PT23B2_07620) pilG 852171..852554 (+) 384 WP_004975524.1 twitching motility response regulator PilG Regulator
  ABXS94_RS03935 (PT23B2_07630) - 852587..852955 (+) 369 WP_004975526.1 response regulator -
  ABXS94_RS03940 (PT23B2_07640) - 852959..853495 (+) 537 WP_004975527.1 chemotaxis protein CheW -
  ABXS94_RS03945 (PT23B2_07650) - 853542..855617 (+) 2076 WP_346791920.1 methyl-accepting chemotaxis protein -
  ABXS94_RS03950 (PT23B2_07660) chpA 855787..860361 (+) 4575 WP_353675579.1 Hpt domain-containing protein Regulator
  ABXS94_RS03955 (PT23B2_07670) - 860365..860823 (+) 459 WP_353675580.1 hypothetical protein -
  ABXS94_RS03960 (PT23B2_07680) dapE 860907..862040 (-) 1134 WP_179988577.1 succinyl-diaminopimelate desuccinylase -
  ABXS94_RS03965 (PT23B2_07690) - 862183..862329 (-) 147 WP_004968261.1 entericidin A/B family lipoprotein -
  ABXS94_RS03970 (PT23B2_07700) - 862450..863334 (-) 885 WP_178318184.1 DUF1853 family protein -
  ABXS94_RS03975 (PT23B2_07710) - 863422..863802 (+) 381 WP_104852333.1 YbaN family protein -
  ABXS94_RS03980 (PT23B2_07720) elsL 863812..864336 (+) 525 WP_004968267.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1524 a.a.        Molecular weight: 168933.55 Da        Isoelectric Point: 4.2039

>NTDB_id=110003 ABXS94_RS03950 WP_353675579.1 855787..860361(+) (chpA) [Acinetobacter towneri strain PT23-B2]
MKEILKNLVETMTLPEDSYLEQDAEILEIFVEEIEEIFEELNPLFTTWFANPTDQETLVTIRRHFHTLKGSGRMVGAKSA
GELAWTVEDTLNRVLSGAVTLNTDIQKYAKTVLNIYQYKLYPIFKQVGLIDLDLRPLVLLGQQLQQNQSPEPALEELLVL
ADQLTATDILTGLELTDAAVETAAVAAVESSEDVMTAEEMPQTEVAQEEAADASLLAETLAIFVEEAEEHLATIDQFLAQ
DQIYSQDYNGLIRALHTLRGSSSMAQINQVFQASSKVENLFKAFVQDEIESTSKETALLVQYAEFVRDYLHVLRQGHCDG
LDVIYATFNKAWDSYGFSTSDTEDSNPQGLVSKLIELNIDRLLDAEFEFDKLAQAQFPSYLEELSAQAQLLVEHTDNRAS
VGIHQFTEELKAAYDSVLAKPILLNSEYGYELFAQAHQEFIHLFDTLAAGQRVTVTEDIQKTLNDLTAFVQQDIDAIALE
DAETSVSDNAVETTVVAEPEAVPAAVASENSGAVNLAQLSQRIASDQQNMHADDANKDFDPDLLDIFLEEAEELLVGMDE
DVNTWSKDASDTSALNNLMRYLHTLKGGANMISATHIGLIAHNLESIYERIINNQIVVSPALIQIIRLVQDDIADRIQTI
RDERVDYAAPESIAILGNIVSLAQGDADVSVASATTAAQPEQTIEAVEEVDAQPELAVEALQDTTADLAEDDAVIADDAH
FEDAAAAAFEPITETVSLEASAESEDEQLHSIVVETFREEAEEILDAADQRLKQWFEQRSDRSILLQLQRAAHSLKGGAR
MAEIESVAQIAYQLESAFEQFAVHQFNSNVYDALLQTTLAWLRDAIFKADYSNYDSLKSSLSAMQFVDVSAQLPERLTHT
DLLSPSRSYEFVQGDGTEPPAMSGEWGETTQLDNSNEMIRISADLVEKMIDLSGENSINRSRIEMELGQLGGTLNEMELA
IKRLADQLRRMEGELESQIIAKHGSENSRYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKSTLAEKIRDAEGLLLQQS
RIQAEIQESLMRTRLVPFSRLLPRLQRIVRQTSSTLNRPTELVVYNTEGELDRTILERLVTPFEHMLRNAVDHGIEDPAQ
RAAANKPEVGKIELNITRQGTDVVVTFVDDGKGIDDAKIKEKALSLGLIKADQNLDKNEILQYIFHPGFTTAQSVTQISG
RGVGLDVVQSEIKALGGHVSVDSTLGQGTTFSIRVPTTVAVSDALMVKVGDQQFAVPLAQIDRIVRIAPTTLESYFNSNE
DFFQIDNQNYKLRYLSEFVGNQPLPRLSHVGHSLPVLLIKGSTGQTIALLVDQLIGSRGQIVVKPIGQQFSSIGAIAGAT
ILGDGQVCLILDGQNIARQILATQRTKQASDQRDSQRRDTRRLIMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAMEQ
LENVKPDLMLLDIEMPRMDGFEVTNLVRHHDMHSNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIEQLLA
VSQG

Nucleotide


Download         Length: 4575 bp        

>NTDB_id=110003 ABXS94_RS03950 WP_353675579.1 855787..860361(+) (chpA) [Acinetobacter towneri strain PT23-B2]
ATGAAAGAAATATTAAAAAATTTAGTCGAAACAATGACGCTTCCTGAAGATAGTTATCTTGAGCAAGATGCGGAAATTCT
TGAAATTTTTGTCGAAGAAATTGAAGAAATCTTCGAAGAATTAAATCCATTATTTACTACTTGGTTTGCGAACCCAACAG
ATCAAGAAACTTTAGTGACTATTCGTCGTCACTTTCACACTTTAAAAGGCTCGGGTCGCATGGTGGGTGCGAAGTCTGCG
GGCGAATTGGCATGGACGGTTGAAGATACTTTAAACCGTGTGCTTTCGGGTGCGGTAACACTCAATACTGATATTCAAAA
ATACGCAAAAACTGTTTTAAATATTTATCAATACAAGCTTTATCCAATTTTTAAGCAAGTCGGTTTAATTGATCTTGATT
TACGCCCATTGGTGCTTTTAGGACAACAATTACAGCAAAACCAAAGTCCTGAACCTGCATTGGAAGAGTTGCTGGTTTTA
GCAGATCAACTGACTGCCACTGATATACTGACAGGGCTAGAATTGACGGATGCTGCAGTTGAAACAGCAGCTGTCGCAGC
AGTTGAATCATCAGAAGATGTAATGACTGCTGAAGAAATGCCGCAGACAGAAGTTGCACAAGAAGAGGCTGCTGATGCGA
GTCTATTGGCTGAAACTCTGGCTATTTTTGTAGAAGAAGCTGAAGAGCATTTAGCGACCATTGATCAGTTCTTGGCACAA
GATCAGATTTACTCACAAGACTATAATGGCTTAATCCGTGCATTACATACACTGCGCGGCAGTTCGTCTATGGCGCAAAT
TAATCAAGTTTTTCAAGCCAGTTCTAAAGTTGAAAACTTGTTTAAAGCGTTTGTACAAGATGAAATTGAATCTACATCAA
AAGAAACTGCGCTGTTGGTGCAATATGCAGAATTTGTCCGGGATTATCTGCATGTACTTCGTCAAGGTCACTGTGATGGT
TTAGATGTAATCTATGCAACTTTTAATAAAGCATGGGATAGCTACGGCTTTAGCACCAGCGATACAGAAGACTCTAATCC
TCAAGGTTTAGTATCGAAGCTAATCGAACTGAATATTGATCGTTTACTTGATGCCGAATTTGAATTTGATAAATTGGCGC
AAGCGCAATTCCCAAGCTATTTAGAAGAACTCAGCGCACAAGCACAATTATTGGTAGAGCATACCGATAACCGTGCGTCT
GTGGGTATCCATCAATTTACTGAAGAACTTAAAGCCGCTTACGACAGTGTTTTAGCCAAGCCAATCTTGCTTAACTCTGA
ATATGGTTATGAGTTATTTGCACAGGCGCACCAAGAGTTTATTCATTTATTCGATACCTTGGCTGCGGGACAGCGTGTTA
CGGTTACAGAAGACATTCAGAAAACCTTAAATGACTTAACTGCATTTGTGCAGCAAGACATTGATGCAATTGCACTTGAA
GATGCTGAAACATCAGTGAGCGACAATGCTGTAGAAACAACAGTTGTTGCAGAACCTGAAGCTGTGCCTGCTGCAGTTGC
TAGCGAAAATTCGGGCGCAGTGAATTTGGCGCAATTGTCACAACGTATTGCATCAGATCAACAAAACATGCATGCCGATG
ATGCCAACAAAGACTTCGATCCTGACTTGCTGGATATCTTCTTGGAGGAAGCAGAAGAGCTTTTGGTGGGTATGGATGAA
GATGTCAATACTTGGTCAAAAGACGCCAGCGATACTTCGGCGTTAAATAACTTAATGCGTTATTTGCACACTTTAAAAGG
TGGTGCAAATATGATTTCTGCGACGCATATTGGTTTAATTGCACACAACCTTGAGTCGATTTACGAGCGTATCATTAACA
ACCAAATTGTTGTTTCACCTGCGTTAATTCAAATTATTCGTTTGGTGCAAGATGATATTGCAGACCGTATTCAGACCATT
CGTGATGAGCGTGTGGACTATGCTGCGCCAGAGTCGATTGCAATTTTAGGCAACATTGTTAGCTTGGCACAAGGCGATGC
AGATGTGTCAGTTGCAAGTGCGACAACCGCAGCGCAGCCTGAACAGACTATTGAGGCAGTAGAAGAGGTTGATGCACAGC
CTGAGTTGGCGGTAGAAGCGTTGCAAGATACAACTGCAGATTTAGCTGAAGATGACGCAGTTATTGCTGATGATGCACAT
TTTGAAGACGCTGCTGCTGCGGCATTTGAGCCGATCACAGAAACTGTAAGTCTTGAAGCAAGTGCTGAATCTGAAGATGA
GCAATTACATTCAATTGTGGTTGAGACTTTCCGAGAAGAAGCGGAAGAAATTTTGGATGCTGCAGATCAGCGTTTGAAAC
AATGGTTTGAGCAGCGTAGTGACCGAAGTATCTTGCTTCAATTACAACGTGCGGCGCACAGCTTAAAAGGCGGTGCACGT
ATGGCTGAAATTGAGTCTGTTGCGCAAATCGCCTATCAACTTGAAAGTGCCTTTGAACAGTTTGCTGTGCATCAATTTAA
CTCAAATGTTTATGATGCTTTATTGCAAACCACGTTGGCGTGGTTGCGTGATGCAATCTTCAAAGCAGATTACAGCAATT
ATGACAGCTTAAAATCTAGCTTGTCGGCGATGCAGTTTGTAGATGTATCTGCGCAATTGCCCGAGCGTTTAACGCATACC
GACTTGTTATCGCCAAGCCGTAGTTATGAGTTTGTTCAGGGTGATGGTACAGAGCCACCTGCAATGTCGGGTGAGTGGGG
CGAAACCACACAGCTGGATAATAGCAATGAGATGATTCGTATCTCTGCCGATTTAGTCGAGAAGATGATTGACTTGTCAG
GCGAGAACTCGATTAACCGTTCACGTATTGAAATGGAGCTTGGGCAACTGGGCGGTACGTTGAATGAGATGGAATTGGCG
ATTAAACGTCTTGCCGATCAGTTACGTCGAATGGAAGGCGAGCTGGAATCGCAAATTATTGCCAAGCACGGTTCTGAAAA
CTCACGTTATGCAGACTTTGACCCATTAGAGATGGATCAATATTCATCGTTGAATCAGTTGTCTAAATCTCTGGCGGAAT
CTGCATCGGACTTGGTGGACTTTAAGAGCACCTTGGCTGAAAAAATTCGTGATGCCGAAGGTTTGTTATTACAACAATCA
CGTATTCAGGCTGAAATTCAAGAAAGCTTGATGCGTACACGCCTTGTACCATTCTCACGTTTATTGCCACGTTTACAACG
TATTGTGCGTCAGACTTCATCGACCTTAAACCGTCCGACAGAACTGGTGGTTTATAACACTGAAGGTGAATTAGACCGTA
CCATTCTAGAGCGTTTGGTGACACCGTTTGAACACATGCTGCGCAACGCGGTCGACCATGGGATTGAAGACCCTGCACAA
CGTGCTGCAGCCAATAAACCTGAAGTTGGTAAAATTGAACTGAACATTACCCGTCAAGGCACAGATGTTGTGGTGACTTT
TGTGGATGATGGTAAGGGTATTGATGATGCCAAGATTAAAGAAAAAGCATTGAGCTTAGGTTTAATCAAAGCCGATCAGA
ATTTAGATAAAAACGAAATTCTGCAATACATTTTCCACCCAGGCTTTACAACAGCACAATCGGTTACACAAATTTCAGGT
CGTGGCGTTGGTTTAGACGTGGTGCAAAGTGAGATTAAGGCGCTCGGCGGTCACGTTTCTGTAGATTCAACATTAGGTCA
AGGCACAACCTTTAGTATTCGTGTACCAACGACGGTTGCTGTATCCGATGCCCTAATGGTTAAAGTTGGTGATCAACAAT
TTGCTGTACCGTTGGCGCAAATTGACCGTATTGTACGTATTGCACCAACCACTTTGGAATCTTACTTCAATAGCAATGAA
GATTTCTTCCAAATTGATAACCAGAACTACAAGTTGCGTTACTTATCTGAGTTCGTTGGCAATCAGCCATTACCGCGTTT
AAGCCATGTGGGTCATTCACTACCTGTCTTGTTAATTAAAGGCAGTACAGGTCAAACCATTGCCTTGCTAGTCGATCAAT
TGATTGGTTCGCGTGGTCAAATTGTTGTGAAACCAATTGGACAACAGTTCTCAAGTATTGGTGCAATTGCAGGCGCAACC
ATTTTGGGTGATGGTCAAGTTTGTTTGATTTTGGATGGTCAGAACATTGCCCGTCAAATTCTTGCAACGCAACGTACCAA
ACAAGCCAGCGATCAACGTGATAGCCAACGTCGTGATACGCGCCGCTTAATTATGATCGTGGATGACTCAGTCACCGTAC
GTAAAGTAACTTCACGTCTGCTTGAGCGTCAAGGTTATGATATCGTGACTGCTAAAGATGGTGTCGATGCCATGGAGCAG
CTTGAAAACGTCAAACCTGACTTGATGTTACTGGATATTGAAATGCCACGTATGGATGGTTTTGAGGTGACTAACCTTGT
GCGCCACCACGACATGCATAGCAATCTGCCGATCATCATGATTACGTCACGTACAGGTGAAAAACACCGCGAACGAGCGT
TTAGCTTGGGTGTGACGCACTACATGGGGAAACCGTTCCAAGAGGCAGAATTGCTTGCCAATATTGAACAATTATTAGCA
GTCAGTCAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.337

100

0.614


Multiple sequence alignment