Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   ACLQ7P_RS06480 Genome accession   NZ_CP181322
Coordinates   1288809..1289930 (+) Length   373 a.a.
NCBI ID   WP_235091746.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain JCK-1398     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1283809..1294930
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLQ7P_RS06445 (ACLQ7P_06445) yjbB 1284239..1285456 (+) 1218 WP_416247643.1 MFS transporter -
  ACLQ7P_RS06450 (ACLQ7P_06450) yjbC 1285620..1286198 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  ACLQ7P_RS06455 (ACLQ7P_06455) spx 1286379..1286774 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  ACLQ7P_RS06460 (ACLQ7P_06460) yjbE 1287029..1287685 (-) 657 WP_014479447.1 TerC family protein -
  ACLQ7P_RS06465 (ACLQ7P_06465) - 1287855..1287995 (+) 141 WP_119122854.1 hypothetical protein -
  ACLQ7P_RS06470 (ACLQ7P_06470) mecA 1287962..1288618 (+) 657 WP_014479448.1 adaptor protein MecA Regulator
  ACLQ7P_RS06475 (ACLQ7P_06475) - 1288613..1288735 (-) 123 WP_021479547.1 hypothetical protein -
  ACLQ7P_RS06480 (ACLQ7P_06480) coiA 1288809..1289930 (+) 1122 WP_235091746.1 competence protein CoiA Machinery gene
  ACLQ7P_RS06485 (ACLQ7P_06485) pepF 1290160..1292013 (+) 1854 WP_326043354.1 oligoendopeptidase F -
  ACLQ7P_RS06490 (ACLQ7P_06490) - 1292027..1292194 (-) 168 WP_003244944.1 hypothetical protein -
  ACLQ7P_RS06495 (ACLQ7P_06495) spxH 1292508..1293407 (-) 900 WP_308153880.1 protease adaptor protein SpxH -
  ACLQ7P_RS06500 (ACLQ7P_06500) bhbI 1293404..1293802 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  ACLQ7P_RS06505 (ACLQ7P_06505) cwlQ 1294057..1294791 (-) 735 WP_250621958.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43795.83 Da        Isoelectric Point: 10.0622

>NTDB_id=1099688 ACLQ7P_RS06480 WP_235091746.1 1288809..1289930(+) (coiA) [Bacillus subtilis subsp. subtilis strain JCK-1398]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGADDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKEINRL
RLLFYEKRQTSFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=1099688 ACLQ7P_RS06480 WP_235091746.1 1288809..1289930(+) (coiA) [Bacillus subtilis subsp. subtilis strain JCK-1398]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCTCCATAGACATCGAACCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACACAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATTCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGACGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAATAAATCGCCTT
AGGCTGCTGTTTTATGAGAAGCGGCAGACATCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTGTATTTGTTTATGACGGATCTTGGAGGTAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTTTGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.391

100

0.984


Multiple sequence alignment