Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   ACM67B_RS02175 Genome accession   NZ_CP181247
Coordinates   441509..443551 (+) Length   680 a.a.
NCBI ID   WP_416189959.1    Uniprot ID   -
Organism   Neisseria sp. CCUG17229     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 436509..448551
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM67B_RS02155 (ACM67B_02155) - 437287..438849 (+) 1563 WP_416189956.1 TerC family protein -
  ACM67B_RS02160 (ACM67B_02160) rng 438913..440406 (-) 1494 WP_416189957.1 ribonuclease G -
  ACM67B_RS02165 (ACM67B_02165) grxC 440694..440951 (+) 258 WP_416189958.1 glutaredoxin 3 -
  ACM67B_RS02170 (ACM67B_02170) secB 440975..441409 (+) 435 WP_095503609.1 protein-export chaperone SecB -
  ACM67B_RS02175 (ACM67B_02175) recG 441509..443551 (+) 2043 WP_416189959.1 ATP-dependent DNA helicase RecG Machinery gene
  ACM67B_RS02180 (ACM67B_02180) - 443649..444185 (+) 537 WP_416189960.1 isochorismatase family protein -
  ACM67B_RS02185 (ACM67B_02185) - 444198..444698 (+) 501 WP_416189961.1 GNAT family N-acetyltransferase -
  ACM67B_RS02190 (ACM67B_02190) - 444755..445987 (-) 1233 WP_416189962.1 N-acetylmuramoyl-L-alanine amidase -
  ACM67B_RS02195 (ACM67B_02195) tsaE 445975..446445 (-) 471 WP_416189963.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACM67B_RS02200 (ACM67B_02200) murI 446713..447522 (+) 810 WP_416189964.1 glutamate racemase -
  ACM67B_RS02205 (ACM67B_02205) - 447691..447990 (+) 300 WP_416189965.1 hypothetical protein -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 74980.60 Da        Isoelectric Point: 6.7655

>NTDB_id=1099565 ACM67B_RS02175 WP_416189959.1 441509..443551(+) (recG) [Neisseria sp. CCUG17229]
MMTPETQKQLKVADTTAQKLDKLNLNSAWDLALHLPLRYEDETHIMPIADAPVGVPCQVEGEVVHQEVTFKPRKQLVVQI
ADGSGSVLHLRFIHFYASHQKQMAVGKRIRAVGEIKRGFYGDEMIHPKIRDAESTGLAESLTPIYPTVNGLNQPTLRRIV
QTALDSIPLHDTLPDDLLGRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRVSGAA
APLNGDGSLVQKLLDSLPFALTQAQQRVVGEIKQDLTETFPMHRLLQGDVGSGKTIVAALSALTAIEAGAQVVVMAPTEI
LAEQHFIKFKQWFEPLGLTVAWLSGSQRKKEKDSNKTAISDGLAQIAVGTHALFQDDVAFHNLGLVIVDEQHRFGVAQRL
ALKNKGNDVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPNRTPIKTRLVNSVRRAEVEGLVLGTCQKGQQAYWVCPLI
EESETLQLQTAVDTLAELQTALPELNIGLVHGRMKPAEKAEVMAEFIAGRLNVLVATTVIEVGVDVPNASLMVIEHAERM
GLAQLHQLRGRVGRGAAASACVLLFTEPLSELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFANLEE
DLHLLEQAREIAPKLIAERLDIVQAHLDRWLSSREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=1099565 ACM67B_RS02175 WP_416189959.1 441509..443551(+) (recG) [Neisseria sp. CCUG17229]
ATGATGACACCCGAAACCCAAAAACAGCTCAAAGTCGCCGACACCACCGCCCAAAAGCTCGACAAGCTGAATTTAAACAG
CGCGTGGGATTTGGCGCTGCACCTGCCTTTGCGCTATGAAGACGAAACCCACATCATGCCGATTGCTGATGCGCCGGTGG
GCGTGCCGTGTCAGGTGGAAGGGGAAGTGGTGCATCAGGAAGTGACCTTCAAGCCGCGCAAGCAATTGGTGGTGCAGATT
GCCGATGGTTCTGGCAGCGTGTTGCATTTGCGTTTTATTCATTTTTACGCCAGCCACCAAAAGCAGATGGCGGTGGGCAA
ACGCATTCGCGCGGTGGGCGAAATCAAGCGTGGGTTTTACGGCGATGAGATGATTCACCCGAAAATCCGCGATGCCGAGA
GCACCGGTTTGGCCGAAAGCCTTACGCCGATTTACCCGACGGTGAATGGCTTAAACCAGCCGACCCTGCGCCGCATTGTT
CAGACGGCCTTAGACAGCATTCCTTTGCACGACACCTTACCCGACGATTTATTAGGCCGTCTGAAACTGCCGCACTTGGC
CGAAAGCCTGCGCCTGCTGCACTCGCCGCCGCCAAGCTTCACCATCCATCAGCTTTCAGACGGCACCTTGCCCGCATGGC
AGCGGCTGAAATTTGACGAACTGTTGGCGCAGCAATTGTCCATGCGTTTGGCGCGACAAAAGCGCGTCAGCGGCGCAGCG
GCACCGTTAAACGGCGATGGCAGTTTGGTGCAAAAGCTGCTCGATTCCTTGCCGTTTGCCCTGACCCAAGCCCAGCAGCG
CGTGGTGGGCGAAATCAAGCAAGACTTGACCGAAACCTTTCCCATGCACCGCCTGCTGCAAGGCGATGTCGGCAGCGGTA
AAACCATTGTTGCTGCATTGTCCGCGCTCACCGCCATCGAAGCCGGCGCACAAGTCGTCGTGATGGCACCGACCGAAATC
TTGGCCGAGCAACACTTTATCAAGTTCAAACAATGGTTTGAGCCGCTGGGTTTGACCGTGGCATGGCTTTCCGGCAGCCA
GCGCAAAAAAGAAAAAGACAGCAACAAAACCGCCATTTCAGACGGCCTTGCCCAAATCGCCGTCGGCACGCATGCGCTGT
TTCAAGACGATGTCGCCTTCCATAATCTCGGCTTGGTGATTGTCGACGAGCAACACCGCTTCGGCGTGGCGCAACGTTTG
GCCCTAAAAAACAAAGGCAACGACGTGCATCAGCTGATGATGTCGGCCACGCCGATTCCGCGCACGCTGGCGATGAGTTT
TTTCGCCGATTTGGACGTGTCCGTCATCGACGAATTGCCGCCCAACCGCACGCCGATTAAAACACGGCTGGTGAATAGCG
TGCGCCGTGCCGAAGTCGAAGGGCTGGTGTTGGGCACTTGCCAAAAAGGGCAGCAGGCGTATTGGGTGTGTCCGCTGATT
GAAGAGAGCGAAACGCTGCAACTGCAAACCGCCGTCGATACCCTTGCCGAGCTTCAGACGGCCTTACCCGAACTCAACAT
CGGCTTGGTACACGGCCGCATGAAACCTGCTGAAAAAGCCGAAGTAATGGCCGAATTTATCGCAGGCCGTCTGAATGTGT
TGGTGGCGACCACCGTGATTGAAGTCGGCGTCGATGTGCCCAATGCCAGCCTGATGGTGATTGAACACGCCGAACGCATG
GGCTTGGCGCAACTGCACCAGCTACGCGGCCGTGTCGGACGGGGTGCCGCCGCCAGTGCCTGCGTGCTGCTGTTTACCGA
GCCCTTGAGCGAACTGGCCAAAGCGCGGCTGAAAGTAATTTACGAACACACCGATGGCTTTGAAATCGCCCGCCAAGACT
TAAATATCCGCGGTCCCGGTGAATTCTTAGGCGCACGCCAAAGCGGCGTGCCGATGCTGCGTTTTGCCAATCTGGAAGAA
GATTTGCACCTGCTCGAACAAGCCCGCGAAATTGCGCCGAAACTGATTGCCGAGCGGCTGGATATTGTGCAGGCGCATTT
GGATCGGTGGTTGAGTAGTCGGGAAGGGTATTTGGGGGTGTGA

Domains

Predicted by InterproScan.

Helicase conserved C-terminal domain (Helicase_C)

(468-575)

DEAD/DEAH box helicase (DEAD)

(283-421)

RecG wedge domain (RecG_wedge)

(11-165)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-662)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

85.441

100

0.854

Multiple sequence alignment