Detailed information NTG1099552

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACM67C_RS10300
• Genome accession: NZ_CP181246
• Coordinates: 2183670..2185208 (-)
• Length: 512 a.a.
• NCBI ID: WP_066076449.1
• Uniprot ID: -
• Organism: Bergeriella denitrificans strain DSM 17675
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 2178670..2190208

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM67C_RS10270 (ACM67C_10270)	rsmH	2178963..2179922 (-)	960	WP_066076463.1	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	-
ACM67C_RS10275 (ACM67C_10275)	mraZ	2179919..2180374 (-)	456	WP_066076456.1	division/cell wall cluster transcriptional repressor MraZ	-
ACM67C_RS10280 (ACM67C_10280)	-	2180727..2181878 (+)	1152	WP_066076455.1	class I SAM-dependent methyltransferase	-
ACM67C_RS10295 (ACM67C_10295)	-	2182310..2183596 (+)	1287	WP_066076452.1	AmpG family muropeptide MFS transporter	-
ACM67C_RS10300 (ACM67C_10300)	pilR	2183670..2185208 (-)	1539	WP_066076449.1	sigma-54-dependent transcriptional regulator	Regulator
ACM67C_RS10305 (ACM67C_10305)	-	2185201..2186787 (-)	1587	WP_066076480.1	two-component system sensor histidine kinase NtrB	-
ACM67C_RS10310 (ACM67C_10310)	parC	2186982..2189282 (-)	2301	WP_066076446.1	DNA topoisomerase IV subunit A	-

Sequence

Protein

• Length: 512 a.a.
• Molecular weight: 57139.15 Da
• Isoelectric Point: 4.8988

>NTDB_id=1099552 ACM67C_RS10300 WP_066076449.1 2183670..2185208(-) (pilR) [Bergeriella denitrificans strain DSM 17675]
MNKLQDPVLVVDDETDIRDLMEMTLMKMGLRVDTAVGVEDAKSKLSAGTYSLVLTDMRMPDGSGLEVVHYINELMSDTPV
AVITAFGNADQAVEALKAGAFDYLQKPITLSQLRSLVKSAISVNEQSEPPARSLPPSEPEVAPEPEPVLTGELFPEAEVP
QPEVQPSETAAPPIGGEADMPRLLGSSPQMVEARHLIRRLARSNVPVYIAGESGTGKEQAARTIHELSERRRRPFVAVNC
GAIPENLMESEFFGYKKGSFTGADQDRQGFFQHADGGTLFLDEVADLPLAMQVKLLRAIQEKAVRRIGEAQETKVDVRIV
CATHKNLEALVESGAFRQDLYYRLNVVSVHMPPLREMREDLKALIAYLLHKHCRGSEHYTLSSKAQEALLHYSYPGNFRE
LENILERAVALTVGQMIQVDDLQIQTHSAEVLKQTLPPEAEPMETASAEAAENGLPPFDPRRMQIQDYLDEVERNILRQV
LQQTRYNRTQAAKLLGISFRSMRYRMERLEIE

Nucleotide

• Length: 1539 bp

>NTDB_id=1099552 ACM67C_RS10300 WP_066076449.1 2183670..2185208(-) (pilR) [Bergeriella denitrificans strain DSM 17675]
ATGAATAAATTACAAGATCCGGTACTGGTCGTTGACGACGAAACCGATATCCGCGACCTGATGGAAATGACCCTGATGAA
AATGGGTTTGCGCGTGGATACCGCTGTTGGCGTGGAAGATGCCAAAAGCAAGCTGTCGGCCGGCACCTATTCGCTGGTGT
TGACCGATATGCGTATGCCCGACGGCTCCGGCCTCGAGGTCGTCCACTACATCAACGAGCTGATGTCGGATACCCCCGTG
GCGGTGATTACCGCTTTCGGCAATGCCGACCAAGCCGTTGAAGCGCTCAAAGCCGGCGCGTTTGATTATCTGCAAAAACC
GATTACCCTGTCGCAGCTGCGCTCGCTGGTGAAATCCGCCATCAGCGTCAACGAACAGAGCGAGCCGCCCGCCCGCAGCC
TGCCGCCGTCCGAGCCGGAAGTGGCGCCCGAGCCTGAGCCGGTGCTGACAGGCGAGCTTTTCCCGGAAGCGGAAGTGCCG
CAGCCCGAAGTGCAGCCGTCTGAAACCGCCGCGCCGCCGATTGGCGGAGAAGCCGATATGCCGCGCCTGCTGGGCAGTTC
GCCGCAAATGGTCGAAGCCCGCCATCTGATCCGCCGCCTGGCACGCAGCAACGTGCCCGTATATATCGCAGGCGAATCGG
GCACGGGTAAAGAGCAGGCCGCGCGCACCATTCACGAGCTGTCCGAGCGCCGCCGCCGCCCCTTTGTGGCCGTCAACTGC
GGCGCCATTCCCGAAAACCTGATGGAAAGCGAGTTTTTCGGCTATAAAAAAGGCAGCTTTACCGGCGCCGACCAAGACCG
CCAGGGCTTTTTCCAACACGCCGACGGCGGCACGCTCTTTCTCGACGAAGTGGCCGACCTGCCGCTGGCCATGCAGGTTA
AACTGCTGCGTGCCATTCAGGAAAAAGCCGTGCGCCGCATCGGCGAAGCGCAGGAAACCAAAGTCGATGTGCGCATCGTG
TGCGCCACGCATAAAAACCTCGAAGCCCTGGTCGAAAGCGGCGCGTTCCGCCAAGACCTGTATTACCGCTTAAACGTCGT
ATCGGTGCATATGCCGCCGCTGCGCGAAATGCGCGAAGATTTGAAGGCGCTGATTGCCTATCTGCTGCACAAACACTGCC
GGGGCAGCGAACACTACACCCTCAGCAGCAAAGCGCAGGAAGCCCTGCTGCATTACAGCTACCCGGGCAACTTCCGCGAG
CTGGAAAATATTTTGGAACGCGCCGTCGCGCTGACAGTGGGGCAGATGATTCAGGTGGACGACCTGCAAATCCAAACCCA
CTCCGCCGAAGTGTTGAAACAGACGCTGCCGCCGGAAGCCGAACCCATGGAAACCGCATCCGCCGAAGCCGCCGAAAACG
GCCTGCCGCCTTTCGACCCGCGCCGTATGCAGATTCAGGATTATCTGGACGAAGTCGAACGCAACATCCTGCGCCAAGTG
TTGCAGCAAACGCGCTACAACCGCACGCAGGCAGCCAAACTCTTGGGCATCAGCTTCCGCTCCATGCGCTACCGGATGGA
GCGTTTGGAGATTGAATAG

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (469-508)

• Sigma-54 interaction domain (Sigma54_activat) (183-349)

• Response regulator receiver domain (Response_reg) (8-117)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	49.209	98.828	0.486
pilR	Acinetobacter baumannii strain A118	41.12	100	0.416