Detailed information
Bioinformatically predicted
Overview
| Name | pilK | Type | Machinery gene |
| Locus tag | ACM67C_RS09255 | Genome accession | NZ_CP181246 |
| Coordinates | 1962850..1963419 (-) | Length | 189 a.a. |
| NCBI ID | WP_066075780.1 | Uniprot ID | A0A378UH85 |
| Organism | Bergeriella denitrificans strain DSM 17675 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1957850..1968419
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM67C_RS09200 (ACM67C_09200) | - | 1958624..1960180 (-) | 1557 | WP_066075791.1 | TerC family protein | - |
| ACM67C_RS09205 (ACM67C_09205) | - | 1960427..1960711 (-) | 285 | WP_066075788.1 | surface lipoprotein assembly modifier | - |
| ACM67C_RS09245 (ACM67C_09245) | pgsA | 1961668..1962231 (-) | 564 | WP_082790373.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| ACM67C_RS09250 (ACM67C_09250) | - | 1962402..1962863 (-) | 462 | WP_066075785.1 | type IV pilin protein | - |
| ACM67C_RS09255 (ACM67C_09255) | pilK | 1962850..1963419 (-) | 570 | WP_066075780.1 | pilus assembly PilX family protein | Machinery gene |
| ACM67C_RS09260 (ACM67C_09260) | - | 1963398..1964339 (-) | 942 | WP_066075777.1 | PilW family protein | - |
| ACM67C_RS09265 (ACM67C_09265) | pilV | 1964339..1964935 (-) | 597 | WP_066075774.1 | type IV pilus modification protein PilV | - |
| ACM67C_RS09270 (ACM67C_09270) | - | 1964954..1965619 (-) | 666 | WP_066075771.1 | GspH/FimT family pseudopilin | - |
| ACM67C_RS09275 (ACM67C_09275) | dnaB | 1965680..1967086 (-) | 1407 | WP_066075768.1 | replicative DNA helicase | - |
| ACM67C_RS09280 (ACM67C_09280) | - | 1967277..1967858 (+) | 582 | WP_066075765.1 | superoxide dismutase | - |
Sequence
Protein
Download Length: 189 a.a. Molecular weight: 20339.10 Da Isoelectric Point: 9.2255
>NTDB_id=1099550 ACM67C_RS09255 WP_066075780.1 1962850..1963419(-) (pilK) [Bergeriella denitrificans strain DSM 17675]
MRQPRLVNAPQRQQGFVLFMVLAVMMVVALFVVAAVQSYNTEQRISANDADRKFAASLAEAALREGERRAVTLDREGAVF
TADCADGLCTAVGSSAPAGRNDIVIEGAPTVPAVSRRCGNALCLDNRSRRYNVGGLNTNKDPRYLIEFIRFDAETGEAVY
RVSAQGRGRIANTAVVVQSYVRVGANAGN
MRQPRLVNAPQRQQGFVLFMVLAVMMVVALFVVAAVQSYNTEQRISANDADRKFAASLAEAALREGERRAVTLDREGAVF
TADCADGLCTAVGSSAPAGRNDIVIEGAPTVPAVSRRCGNALCLDNRSRRYNVGGLNTNKDPRYLIEFIRFDAETGEAVY
RVSAQGRGRIANTAVVVQSYVRVGANAGN
Nucleotide
Download Length: 570 bp
>NTDB_id=1099550 ACM67C_RS09255 WP_066075780.1 1962850..1963419(-) (pilK) [Bergeriella denitrificans strain DSM 17675]
ATGCGCCAACCGCGTCTGGTAAATGCCCCGCAGCGGCAGCAGGGTTTTGTGCTGTTTATGGTGTTGGCGGTGATGATGGT
GGTGGCTCTGTTTGTGGTGGCTGCCGTGCAGTCCTACAACACGGAGCAGCGCATCAGTGCCAACGATGCCGACCGGAAAT
TCGCCGCTTCTTTGGCCGAAGCCGCTTTGCGTGAGGGTGAGCGGCGGGCGGTCACCCTGGATAGGGAAGGGGCGGTTTTT
ACCGCCGATTGTGCGGACGGATTGTGTACCGCAGTCGGCTCGTCCGCGCCTGCGGGCAGAAACGATATTGTGATTGAAGG
CGCGCCGACCGTACCCGCTGTATCGCGCCGCTGCGGTAATGCCTTGTGTTTGGATAACCGCAGTCGAAGATATAATGTCG
GCGGCTTGAATACCAATAAAGACCCGCGCTATCTGATTGAGTTTATCCGCTTTGATGCCGAAACCGGCGAAGCCGTTTAT
CGGGTCAGCGCGCAAGGCCGGGGCAGGATTGCCAATACGGCGGTGGTGGTGCAATCGTATGTAAGGGTGGGCGCAAATGC
GGGCAACTAA
ATGCGCCAACCGCGTCTGGTAAATGCCCCGCAGCGGCAGCAGGGTTTTGTGCTGTTTATGGTGTTGGCGGTGATGATGGT
GGTGGCTCTGTTTGTGGTGGCTGCCGTGCAGTCCTACAACACGGAGCAGCGCATCAGTGCCAACGATGCCGACCGGAAAT
TCGCCGCTTCTTTGGCCGAAGCCGCTTTGCGTGAGGGTGAGCGGCGGGCGGTCACCCTGGATAGGGAAGGGGCGGTTTTT
ACCGCCGATTGTGCGGACGGATTGTGTACCGCAGTCGGCTCGTCCGCGCCTGCGGGCAGAAACGATATTGTGATTGAAGG
CGCGCCGACCGTACCCGCTGTATCGCGCCGCTGCGGTAATGCCTTGTGTTTGGATAACCGCAGTCGAAGATATAATGTCG
GCGGCTTGAATACCAATAAAGACCCGCGCTATCTGATTGAGTTTATCCGCTTTGATGCCGAAACCGGCGAAGCCGTTTAT
CGGGTCAGCGCGCAAGGCCGGGGCAGGATTGCCAATACGGCGGTGGTGGTGCAATCGTATGTAAGGGTGGGCGCAAATGC
GGGCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilK | Neisseria gonorrhoeae MS11 |
46.193 |
100 |
0.481 |