Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | ACM67C_RS02855 | Genome accession | NZ_CP181246 |
| Coordinates | 577502..578104 (-) | Length | 200 a.a. |
| NCBI ID | WP_066077389.1 | Uniprot ID | A0A378UFJ9 |
| Organism | Bergeriella denitrificans strain DSM 17675 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 572502..583104
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM67C_RS02835 (ACM67C_02835) | - | 573571..574098 (-) | 528 | WP_066077375.1 | shikimate kinase | - |
| ACM67C_RS02840 (ACM67C_02840) | pilQ | 574210..576264 (-) | 2055 | WP_066077383.1 | type IV pilus secretin PilQ | Machinery gene |
| ACM67C_RS02845 (ACM67C_02845) | - | 576320..576862 (-) | 543 | WP_115225345.1 | pilus assembly protein PilP | - |
| ACM67C_RS02850 (ACM67C_02850) | - | 576873..577502 (-) | 630 | WP_066077386.1 | type 4a pilus biogenesis protein PilO | - |
| ACM67C_RS02855 (ACM67C_02855) | pilN | 577502..578104 (-) | 603 | WP_066077389.1 | PilN domain-containing protein | Machinery gene |
| ACM67C_RS02860 (ACM67C_02860) | pilM | 578105..579211 (-) | 1107 | WP_066077392.1 | type IV pilus assembly protein PilM | - |
| ACM67C_RS02865 (ACM67C_02865) | - | 579374..581770 (+) | 2397 | WP_066077395.1 | penicillin-binding protein 1A | - |
| ACM67C_RS02870 (ACM67C_02870) | - | 582065..582580 (+) | 516 | WP_066077397.1 | adenylyltransferase/cytidyltransferase family protein | - |
Sequence
Protein
Download Length: 200 a.a. Molecular weight: 22184.31 Da Isoelectric Point: 8.3999
>NTDB_id=1099534 ACM67C_RS02855 WP_066077389.1 577502..578104(-) (pilN) [Bergeriella denitrificans strain DSM 17675]
MIEPVKINLLPYRETERLHKQQQFKVLMLSALIGGLALAVGAYVALGAAIGNQESRNRHLENEIGKLDQNLGEIQKLQQE
KERFLAKKQKVEELQQARHRAARMLDTLNARIPADTYLTSLEAESPDTYKLSGRALNDNKIAVFMQALPAGGVFGQPELL
GIQKNGSYQSFTLKARLSDASAEPEAPQTPQPTQTQEPQP
MIEPVKINLLPYRETERLHKQQQFKVLMLSALIGGLALAVGAYVALGAAIGNQESRNRHLENEIGKLDQNLGEIQKLQQE
KERFLAKKQKVEELQQARHRAARMLDTLNARIPADTYLTSLEAESPDTYKLSGRALNDNKIAVFMQALPAGGVFGQPELL
GIQKNGSYQSFTLKARLSDASAEPEAPQTPQPTQTQEPQP
Nucleotide
Download Length: 603 bp
>NTDB_id=1099534 ACM67C_RS02855 WP_066077389.1 577502..578104(-) (pilN) [Bergeriella denitrificans strain DSM 17675]
ATGATCGAACCGGTAAAAATCAACCTGCTGCCCTACCGCGAAACCGAGCGCCTGCATAAACAGCAGCAGTTTAAAGTATT
GATGCTCTCCGCCCTAATCGGCGGGCTTGCCCTGGCCGTCGGCGCTTATGTCGCGCTCGGTGCCGCCATCGGCAACCAGG
AAAGCCGCAACCGCCATTTGGAAAACGAAATCGGCAAGCTCGACCAAAATCTGGGCGAAATCCAAAAACTCCAGCAGGAA
AAAGAGCGTTTTCTGGCCAAAAAGCAAAAAGTGGAAGAGCTGCAACAAGCGCGCCACCGAGCCGCCCGTATGCTTGATAC
GCTCAACGCCCGCATTCCCGCCGATACCTACCTGACATCACTTGAAGCGGAAAGCCCCGACACCTACAAACTCTCCGGCC
GCGCCTTAAACGACAACAAAATCGCCGTATTTATGCAGGCGCTGCCCGCAGGCGGCGTATTCGGGCAGCCCGAGTTGCTC
GGCATCCAAAAAAACGGCAGCTATCAGTCTTTTACCCTGAAAGCCCGCCTGTCCGATGCAAGTGCAGAGCCTGAAGCCCC
GCAAACGCCGCAACCGACCCAGACACAGGAGCCGCAACCGTAA
ATGATCGAACCGGTAAAAATCAACCTGCTGCCCTACCGCGAAACCGAGCGCCTGCATAAACAGCAGCAGTTTAAAGTATT
GATGCTCTCCGCCCTAATCGGCGGGCTTGCCCTGGCCGTCGGCGCTTATGTCGCGCTCGGTGCCGCCATCGGCAACCAGG
AAAGCCGCAACCGCCATTTGGAAAACGAAATCGGCAAGCTCGACCAAAATCTGGGCGAAATCCAAAAACTCCAGCAGGAA
AAAGAGCGTTTTCTGGCCAAAAAGCAAAAAGTGGAAGAGCTGCAACAAGCGCGCCACCGAGCCGCCCGTATGCTTGATAC
GCTCAACGCCCGCATTCCCGCCGATACCTACCTGACATCACTTGAAGCGGAAAGCCCCGACACCTACAAACTCTCCGGCC
GCGCCTTAAACGACAACAAAATCGCCGTATTTATGCAGGCGCTGCCCGCAGGCGGCGTATTCGGGCAGCCCGAGTTGCTC
GGCATCCAAAAAAACGGCAGCTATCAGTCTTTTACCCTGAAAGCCCGCCTGTCCGATGCAAGTGCAGAGCCTGAAGCCCC
GCAAACGCCGCAACCGACCCAGACACAGGAGCCGCAACCGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Neisseria meningitidis strain C311 |
50.259 |
96.5 |
0.485 |