Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | ACM67D_RS00500 | Genome accession | NZ_CP181245 |
| Coordinates | 107310..107909 (-) | Length | 199 a.a. |
| NCBI ID | WP_003704911.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain LNP 16626 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 102310..112909
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM67D_RS00485 (ACM67D_00485) | pilQ | 103909..106080 (-) | 2172 | WP_050164031.1 | type IV pilus secretin PilQ | Machinery gene |
| ACM67D_RS00490 (ACM67D_00490) | pilP | 106099..106644 (-) | 546 | WP_003692554.1 | pilus assembly protein PilP | Machinery gene |
| ACM67D_RS00495 (ACM67D_00495) | - | 106662..107309 (-) | 648 | WP_003690570.1 | type 4a pilus biogenesis protein PilO | - |
| ACM67D_RS00500 (ACM67D_00500) | pilN | 107310..107909 (-) | 600 | WP_003704911.1 | PilN domain-containing protein | Machinery gene |
| ACM67D_RS00505 (ACM67D_00505) | pilM | 107912..109027 (-) | 1116 | WP_003696683.1 | type IV pilus biogenesis protein PilM | - |
| ACM67D_RS00510 (ACM67D_00510) | - | 109179..111575 (+) | 2397 | WP_003687357.1 | penicillin-binding protein 1A | - |
| ACM67D_RS00515 (ACM67D_00515) | yihA | 111695..112324 (-) | 630 | WP_003687358.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22211.58 Da Isoelectric Point: 9.8898
>NTDB_id=1099479 ACM67D_RS00500 WP_003704911.1 107310..107909(-) (pilN) [Neisseria gonorrhoeae strain LNP 16626]
MNNLIKINLLPYREEMNKRKQQQFKTLMYGVVLTGVAAVAATYLFIDNMINKQSEKNTLLEISIAHLDTELSEIQKLKQE
KDAFLIKKNKIGELQIKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
MNNLIKINLLPYREEMNKRKQQQFKTLMYGVVLTGVAAVAATYLFIDNMINKQSEKNTLLEISIAHLDTELSEIQKLKQE
KDAFLIKKNKIGELQIKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
Nucleotide
Download Length: 600 bp
>NTDB_id=1099479 ACM67D_RS00500 WP_003704911.1 107310..107909(-) (pilN) [Neisseria gonorrhoeae strain LNP 16626]
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAACGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGCGTCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAAACAGT
CGGAAAAAAACACGCTGCTGGAAATCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATCGGGGAGCTCCAGATCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTAACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCTATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAACGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGCGTCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAAACAGT
CGGAAAAAAACACGCTGCTGGAAATCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATCGGGGAGCTCCAGATCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTAACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCTATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Neisseria meningitidis strain C311 |
96.985 |
100 |
0.97 |