Detailed information NTG0109892

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACGHTT_RS02925
• Genome accession: NZ_AP031497
• Coordinates: 656886..658220 (-)
• Length: 444 a.a.
• NCBI ID: WP_390593388.1
• Uniprot ID: -
• Organism: Simiduia litorea strain KMM 9504
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 651886..663220

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGHTT_RS02905 (R50072_05740)	-	651935..655417 (+)	3483	WP_390593384.1	pilus assembly protein	-
ACGHTT_RS02910 (R50072_05750)	-	655428..655724 (+)	297	WP_390593385.1	hypothetical protein	-
ACGHTT_RS02915 (R50072_05760)	-	655748..656200 (+)	453	WP_390593386.1	type IV pilin protein	-
ACGHTT_RS02920	-	656210..656773 (-)	564	WP_390593387.1	GspH/FimT family pseudopilin	-
ACGHTT_RS02925 (R50072_05770)	pilR	656886..658220 (-)	1335	WP_390593388.1	sigma-54-dependent transcriptional regulator	Regulator
ACGHTT_RS02930 (R50072_05780)	-	658217..659833 (-)	1617	WP_390593389.1	nitrogen regulation protein NR(II)	-
ACGHTT_RS02935 (R50072_05790)	-	659950..661581 (+)	1632	WP_390593391.1	NAD+ synthase	-
ACGHTT_RS02940 (R50072_05800)	pssA	661638..662501 (+)	864	WP_390593393.1	CDP-diacylglycerol--serine O-phosphatidyltransferase	-

Sequence

Protein

• Length: 444 a.a.
• Molecular weight: 49505.91 Da
• Isoelectric Point: 6.4474

>NTDB_id=109892 ACGHTT_RS02925 WP_390593388.1 656886..658220(-) (pilR) [Simiduia litorea strain KMM 9504]
MKKNSALIVDDEPDILELLNITLTRMDFGCILAASLKEAKQALASHKFDICLTDMRMPDGNGIDLVKHIQNEHPDLPVAV
ITAHGNVDIAIESMKAGAFDFLSKPIDIERLRALVKTAIKSSSPKETLESELLVGTTDVMRKLKQQIHKLARSQAPILIT
GESGCGKELIARSIHSQGPRSEGPFIAINCGAIPRELMESEFFGHKKGSFTGANSDKIGLFQAAEGGTLFLDEVADLPLD
MQVKLLRAIQEKAIRPVGTQAEQKTNIRILSATHKNLQNEIGAGNFRQDLYYRINVIHLHAPALRDRIEDLEVLTSAILD
KLALTYESEKIALTPEAIRHLKRYPFPGNVRELENTLERAFTLCEGNTIRHDDLQLAPIQPEISCTQSDELNGQALDKKL
EDIERAFITKALEETRWNRTEAAQHLGISFRSLRYRLKKLGMDE

Nucleotide

• Length: 1335 bp

>NTDB_id=109892 ACGHTT_RS02925 WP_390593388.1 656886..658220(-) (pilR) [Simiduia litorea strain KMM 9504]
TTGAAAAAAAATTCTGCGTTAATTGTAGATGATGAGCCAGACATCTTAGAACTCCTCAATATTACACTGACGAGGATGGA
TTTTGGCTGCATACTTGCTGCATCACTAAAGGAAGCCAAACAAGCTCTAGCGTCGCATAAATTTGACATCTGTTTAACCG
ACATGAGAATGCCTGATGGTAACGGCATCGATCTGGTCAAACATATTCAAAATGAACATCCGGATCTCCCCGTAGCTGTA
ATTACAGCTCACGGGAACGTCGACATCGCCATAGAATCAATGAAAGCCGGTGCATTCGACTTTTTATCCAAACCTATCGA
CATTGAAAGACTTAGGGCTTTAGTAAAAACCGCCATCAAATCCAGCTCACCGAAAGAAACATTGGAGAGTGAATTACTTG
TCGGGACCACCGACGTGATGCGAAAGCTAAAGCAACAAATTCATAAGCTAGCTAGAAGCCAGGCGCCAATACTCATAACG
GGTGAATCAGGGTGCGGCAAAGAGCTGATTGCTCGCTCGATCCATTCACAAGGCCCAAGATCCGAAGGTCCATTTATTGC
AATAAACTGTGGGGCGATACCAAGAGAGCTAATGGAAAGTGAATTTTTCGGGCACAAAAAGGGTAGTTTCACTGGCGCGA
ACTCGGACAAGATTGGACTTTTTCAAGCAGCTGAGGGAGGCACACTTTTTCTCGATGAAGTAGCAGACCTACCATTAGAT
ATGCAAGTGAAACTACTAAGGGCTATCCAAGAAAAAGCCATTAGACCTGTAGGAACGCAGGCGGAGCAAAAAACAAACAT
TCGTATACTAAGCGCAACCCATAAAAACCTACAAAATGAAATCGGTGCCGGAAACTTCCGACAAGACTTATACTACAGAA
TAAATGTTATTCACCTGCACGCCCCCGCATTGCGAGACCGAATTGAAGACCTAGAAGTTTTAACCTCAGCAATTCTTGAC
AAGCTCGCTTTAACCTACGAGTCAGAAAAAATCGCCTTAACGCCAGAGGCAATCAGGCACCTCAAGCGCTACCCCTTCCC
TGGCAATGTGCGCGAACTAGAGAATACACTTGAAAGAGCCTTCACCCTTTGTGAAGGCAATACTATTCGCCATGATGATT
TACAGCTCGCACCCATTCAACCGGAAATCTCTTGCACTCAAAGTGATGAGCTGAACGGGCAAGCCCTAGATAAAAAGCTT
GAGGACATCGAGAGAGCCTTTATAACCAAAGCATTAGAAGAAACACGCTGGAACAGAACTGAAGCCGCCCAGCATTTAGG
CATAAGCTTCAGATCTCTACGATATAGACTCAAAAAACTAGGTATGGACGAATAG

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (400-440)

• Response regulator receiver domain (Response_reg) (7-115)

• Sigma-54 interaction domain (Sigma54_activat) (133-299)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	61.074	100	0.615
pilR	Acinetobacter baumannii strain A118	49.02	100	0.507