Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   ACM6AQ_RS07590 Genome accession   NZ_CP181136
Coordinates   1581027..1581713 (-) Length   228 a.a.
NCBI ID   WP_098817867.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AG21-0619     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1576027..1586713
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM6AQ_RS07570 (ACM6AQ_07570) rpsT 1576941..1577192 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  ACM6AQ_RS07575 (ACM6AQ_07575) holA 1577237..1578211 (-) 975 WP_001282570.1 DNA polymerase III subunit delta -
  ACM6AQ_RS07580 (ACM6AQ_07580) comEC 1578268..1580469 (-) 2202 WP_172440430.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACM6AQ_RS07585 (ACM6AQ_07585) - 1580474..1580935 (-) 462 WP_000439693.1 ComE operon protein 2 -
  ACM6AQ_RS07590 (ACM6AQ_07590) comEA 1581027..1581713 (-) 687 WP_098817867.1 ComEA family DNA-binding protein Machinery gene
  ACM6AQ_RS07595 (ACM6AQ_07595) - 1581753..1582469 (-) 717 WP_098817868.1 class I SAM-dependent DNA methyltransferase -
  ACM6AQ_RS07600 (ACM6AQ_07600) rsfS 1582472..1582825 (-) 354 WP_001088020.1 ribosome silencing factor -
  ACM6AQ_RS07605 (ACM6AQ_07605) yqeK 1582826..1583410 (-) 585 WP_098817869.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ACM6AQ_RS07610 (ACM6AQ_07610) nadD 1583400..1583969 (-) 570 WP_072491732.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  ACM6AQ_RS07615 (ACM6AQ_07615) yhbY 1583972..1584262 (-) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  ACM6AQ_RS07620 (ACM6AQ_07620) aroE 1584266..1585072 (-) 807 WP_000666747.1 shikimate dehydrogenase -
  ACM6AQ_RS07625 (ACM6AQ_07625) yqeH 1585086..1586186 (-) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25751.41 Da        Isoelectric Point: 9.6753

>NTDB_id=1098871 ACM6AQ_RS07590 WP_098817867.1 1581027..1581713(-) (comEA) [Staphylococcus aureus strain AG21-0619]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLSDQKMIFIPHKGQKNVEPQIGVNSVHVKN
GNTNNTKVNLNTASVSELMSVTGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=1098871 ACM6AQ_RS07590 WP_098817867.1 1581027..1581713(-) (comEA) [Staphylococcus aureus strain AG21-0619]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCTAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCGAAATTAGAAGATGTTCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTATCAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACAGTGTGCACGTAAAAAAT
GGAAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTACTGGAGTTGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

97.797

99.561

0.974
  comEA Staphylococcus aureus N315

97.797

99.561

0.974

Multiple sequence alignment