Detailed information NTG1098821

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: ACM6EM_RS08115
• Genome accession: NZ_CP181134
• Coordinates: 1662064..1662561 (-)
• Length: 165 a.a.
• NCBI ID: WP_416152278.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain AG21-0594
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1657064..1667561

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM6EM_RS08090 (ACM6EM_08090)	gcvPB	1657226..1658698 (-)	1473	WP_000202189.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	-
ACM6EM_RS08095 (ACM6EM_08095)	gcvPA	1658691..1660037 (-)	1347	WP_000019687.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
ACM6EM_RS08100 (ACM6EM_08100)	gcvT	1660057..1661148 (-)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-
ACM6EM_RS08105 (ACM6EM_08105)	-	1661307..1661831 (-)	525	WP_001015117.1	shikimate kinase	-
ACM6EM_RS08110 (ACM6EM_08110)	-	1661821..1661967 (-)	147	WP_001789879.1	hypothetical protein	-
ACM6EM_RS08115 (ACM6EM_08115)	comGF	1662064..1662561 (-)	498	WP_416152278.1	competence type IV pilus minor pilin ComGF	Machinery gene
ACM6EM_RS08120 (ACM6EM_08120)	comGE	1662479..1662778 (-)	300	WP_000844413.1	hypothetical protein	Machinery gene
ACM6EM_RS08125 (ACM6EM_08125)	comGD	1662765..1663211 (-)	447	WP_001791635.1	competence type IV pilus minor pilin ComGD	Machinery gene
ACM6EM_RS08130 (ACM6EM_08130)	comGC	1663189..1663500 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
ACM6EM_RS08135 (ACM6EM_08135)	comGB	1663514..1664584 (-)	1071	WP_000775708.1	competence type IV pilus assembly protein ComGB	Machinery gene
ACM6EM_RS08140 (ACM6EM_08140)	comGA	1664556..1665530 (-)	975	WP_000697228.1	competence type IV pilus ATPase ComGA	Machinery gene
ACM6EM_RS08145 (ACM6EM_08145)	-	1665582..1666205 (-)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
ACM6EM_RS08150 (ACM6EM_08150)	-	1666202..1666531 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
ACM6EM_RS08155 (ACM6EM_08155)	-	1666531..1667517 (-)	987	WP_000161314.1	ROK family glucokinase	-

Sequence

Protein

• Length: 165 a.a.
• Molecular weight: 19136.87 Da
• Isoelectric Point: 10.1965

>NTDB_id=1098821 ACM6EM_RS08115 WP_416152278.1 1662064..1662561(-) (comGF) [Staphylococcus aureus strain AG21-0594]
MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVISITLLIVPDLIKLSKTFLIESRDLTTVDFEFFSRDI
LDDFKGVDRNDIEIRQHRIILHKGEEMIEYKLINNKIIKVVNDRGNITMINNVTAFTANIYYKSIIKITITVKVGTNVQT
KTIYV

Nucleotide

• Length: 498 bp

>NTDB_id=1098821 ACM6EM_RS08115 WP_416152278.1 1662064..1662561(-) (comGF) [Staphylococcus aureus strain AG21-0594]
ATGATATTAAGCAAAGTGACCAACAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTAT
TAATGTCAAAGCTTTTTCGCTCATTGAAATGTTAGTAGCGATGATGGTTATAAGTATAACTTTACTAATTGTTCCAGACT
TAATTAAACTTAGTAAAACTTTTCTAATTGAAAGTAGGGATTTAACAACTGTAGATTTCGAATTTTTCTCAAGAGATATT
CTAGATGATTTTAAAGGAGTAGATAGAAACGATATTGAAATTAGGCAACACCGTATCATTTTACATAAAGGTGAAGAAAT
GATCGAATACAAATTAATTAATAATAAAATTATTAAAGTTGTAAATGACAGAGGAAATATAACAATGATTAATAATGTTA
CAGCATTTACTGCAAATATCTACTATAAATCCATTATTAAAATAACGATAACAGTTAAAGTCGGTACAAATGTGCAGACT
AAAACTATTTATGTATAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (67-155)

• Prokaryotic N-terminal methylation motif (N_methyl) (28-51)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Staphylococcus aureus MW2	99.394	100	0.994
comGF	Staphylococcus aureus N315	95.758	100	0.958