Detailed information NTG1098779

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: ACM6AS_RS08090
• Genome accession: NZ_CP181131
• Coordinates: 1660649..1661146 (-)
• Length: 165 a.a.
• NCBI ID: WP_416152278.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain AG21-0621
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1655649..1666146

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM6AS_RS08065 (ACM6AS_08065)	gcvPB	1655811..1657283 (-)	1473	WP_000202189.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	-
ACM6AS_RS08070 (ACM6AS_08070)	gcvPA	1657276..1658622 (-)	1347	WP_000019687.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
ACM6AS_RS08075 (ACM6AS_08075)	gcvT	1658642..1659733 (-)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-
ACM6AS_RS08080 (ACM6AS_08080)	-	1659892..1660416 (-)	525	WP_001015117.1	shikimate kinase	-
ACM6AS_RS08085 (ACM6AS_08085)	-	1660406..1660552 (-)	147	WP_001789879.1	hypothetical protein	-
ACM6AS_RS08090 (ACM6AS_08090)	comGF	1660649..1661146 (-)	498	WP_416152278.1	competence type IV pilus minor pilin ComGF	Machinery gene
ACM6AS_RS08095 (ACM6AS_08095)	comGE	1661064..1661363 (-)	300	WP_000844413.1	hypothetical protein	Machinery gene
ACM6AS_RS08100 (ACM6AS_08100)	comGD	1661350..1661796 (-)	447	WP_001791635.1	competence type IV pilus minor pilin ComGD	Machinery gene
ACM6AS_RS08105 (ACM6AS_08105)	comGC	1661774..1662085 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
ACM6AS_RS08110 (ACM6AS_08110)	comGB	1662099..1663169 (-)	1071	WP_000775708.1	competence type IV pilus assembly protein ComGB	Machinery gene
ACM6AS_RS08115 (ACM6AS_08115)	comGA	1663141..1664115 (-)	975	WP_000697228.1	competence type IV pilus ATPase ComGA	Machinery gene
ACM6AS_RS08120 (ACM6AS_08120)	-	1664167..1664790 (-)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
ACM6AS_RS08125 (ACM6AS_08125)	-	1664787..1665116 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
ACM6AS_RS08130 (ACM6AS_08130)	-	1665116..1666102 (-)	987	WP_000161314.1	ROK family glucokinase	-

Sequence

Protein

• Length: 165 a.a.
• Molecular weight: 19136.87 Da
• Isoelectric Point: 10.1965

>NTDB_id=1098779 ACM6AS_RS08090 WP_416152278.1 1660649..1661146(-) (comGF) [Staphylococcus aureus strain AG21-0621]
MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVISITLLIVPDLIKLSKTFLIESRDLTTVDFEFFSRDI
LDDFKGVDRNDIEIRQHRIILHKGEEMIEYKLINNKIIKVVNDRGNITMINNVTAFTANIYYKSIIKITITVKVGTNVQT
KTIYV

Nucleotide

• Length: 498 bp

>NTDB_id=1098779 ACM6AS_RS08090 WP_416152278.1 1660649..1661146(-) (comGF) [Staphylococcus aureus strain AG21-0621]
ATGATATTAAGCAAAGTGACCAACAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTAT
TAATGTCAAAGCTTTTTCGCTCATTGAAATGTTAGTAGCGATGATGGTTATAAGTATAACTTTACTAATTGTTCCAGACT
TAATTAAACTTAGTAAAACTTTTCTAATTGAAAGTAGGGATTTAACAACTGTAGATTTCGAATTTTTCTCAAGAGATATT
CTAGATGATTTTAAAGGAGTAGATAGAAACGATATTGAAATTAGGCAACACCGTATCATTTTACATAAAGGTGAAGAAAT
GATCGAATACAAATTAATTAATAATAAAATTATTAAAGTTGTAAATGACAGAGGAAATATAACAATGATTAATAATGTTA
CAGCATTTACTGCAAATATCTACTATAAATCCATTATTAAAATAACGATAACAGTTAAAGTCGGTACAAATGTGCAGACT
AAAACTATTTATGTATAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (67-155)

• Prokaryotic N-terminal methylation motif (N_methyl) (28-51)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Staphylococcus aureus MW2	99.394	100	0.994
comGF	Staphylococcus aureus N315	95.758	100	0.958