Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   ABXG87_RS10120 Genome accession   NZ_AP031488
Coordinates   2118709..2119476 (+) Length   255 a.a.
NCBI ID   WP_045769300.1    Uniprot ID   A0AAX1Y9S2
Organism   Streptococcus salivarius strain NBRC 13956     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2113709..2124476
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABXG87_RS10105 (Ssa13956_19230) - 2116023..2116706 (-) 684 WP_353551612.1 YoaK family protein -
  ABXG87_RS10110 (Ssa13956_19240) rlmH 2116722..2117201 (-) 480 WP_002887123.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ABXG87_RS10115 (Ssa13956_19250) htrA 2117407..2118642 (+) 1236 WP_045769301.1 trypsin-like peptidase domain-containing protein Regulator
  ABXG87_RS10120 (Ssa13956_19260) spo0J 2118709..2119476 (+) 768 WP_045769300.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 29422.84 Da        Isoelectric Point: 9.4081

>NTDB_id=109830 ABXG87_RS10120 WP_045769300.1 2118709..2119476(+) (spo0J) [Streptococcus salivarius strain NBRC 13956]
MQEQLKALPISDIYPNPFQPRIEFSDEELAELSQSISENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLINELAYSHEELAKAMGKSRPYISNSLRLLQLPQEIQTSIENGKLSQG
HARALLAVEDTKKQLTIYHQVLTEKWSVRTLEKRLQELPKKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=109830 ABXG87_RS10120 WP_045769300.1 2118709..2119476(+) (spo0J) [Streptococcus salivarius strain NBRC 13956]
ATGCAAGAACAACTCAAAGCTTTACCTATTAGTGACATCTATCCCAATCCTTTTCAACCTCGTATAGAGTTCTCTGATGA
AGAATTAGCAGAGCTAAGCCAATCAATCTCAGAAAATGGACTGATACAGCCAATCATTGTCCGAAAATCGGATATTATTG
GTTATGAACTAATTGCTGGGGAAAGACGTTTACGTGCCTGTAAACGTCTAGGAATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAAAGCCGTAAACAAGCTATTATTGAAAATTTACAACGATCGAATCTCAATCCCATTGAAGAAGC
AAAGGCCTATCGTAATTTAATTAATGAGCTAGCTTATAGTCACGAGGAACTGGCGAAAGCTATGGGAAAATCCAGACCCT
ATATCAGTAACTCTCTCAGACTCCTCCAACTTCCCCAAGAGATACAGACGAGTATCGAAAATGGCAAACTGAGTCAAGGA
CATGCTAGAGCACTTTTAGCTGTTGAGGATACAAAAAAGCAATTAACTATCTATCATCAGGTCCTTACTGAAAAATGGTC
AGTTCGTACCCTGGAAAAAAGACTTCAAGAACTTCCAAAAAAACAAAAATCAAAAAAAGATATTCATATAAAAGATAAAG
AAAAAGAACTGGAAAAATCACTTGGTCTCCCCGTTACTCTTCGTTATCACAAAAATCACTCTGGAACTATTCAGATCCAC
TTTTCGACGGAAGAAGATTTTAACAGAATTATCAACAAGCTTATTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.431

100

0.584


Multiple sequence alignment