Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | ACM59W_RS26975 | Genome accession | NZ_CP181089 |
| Coordinates | 5667331..5667888 (+) | Length | 185 a.a. |
| NCBI ID | WP_003102600.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain ST175LTH | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5662331..5672888
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM59W_RS26955 (ACM59W_26955) | pilR | 5663607..5664944 (+) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
| ACM59W_RS26960 (ACM59W_26960) | thiO | 5664990..5666084 (-) | 1095 | WP_020750388.1 | glycine oxidase ThiO | - |
| ACM59W_RS26965 (ACM59W_26965) | - | 5666219..5666728 (+) | 510 | WP_003102595.1 | GspH/FimT family pseudopilin | - |
| ACM59W_RS26970 (ACM59W_26970) | - | 5666834..5667340 (+) | 507 | WP_003102598.1 | GspH/FimT family pseudopilin | - |
| ACM59W_RS26975 (ACM59W_26975) | pilV | 5667331..5667888 (+) | 558 | WP_003102600.1 | type 4a pilus minor pilin PilV | Machinery gene |
| ACM59W_RS26980 (ACM59W_26980) | pilW | 5667885..5668709 (+) | 825 | WP_003119422.1 | type 4a pilus minor pilin PilW | - |
| ACM59W_RS26985 (ACM59W_26985) | pilX | 5668706..5669293 (+) | 588 | WP_003102605.1 | type 4a pilus minor pilin PilX | - |
| ACM59W_RS26990 (ACM59W_26990) | pilY1 | 5669305..5672796 (+) | 3492 | WP_003102607.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20047.13 Da Isoelectric Point: 8.2254
>NTDB_id=1098148 ACM59W_RS26975 WP_003102600.1 5667331..5667888(+) (pilV) [Pseudomonas aeruginosa strain ST175LTH]
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVDRNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVDRNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=1098148 ACM59W_RS26975 WP_003102600.1 5667331..5667888(+) (pilV) [Pseudomonas aeruginosa strain ST175LTH]
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGATCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCAAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTTGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGATCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCAAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTTGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
98.919 |
100 |
0.989 |