Detailed information NTG1097483

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACM0O0_RS17620
• Genome accession: NZ_CP180689
• Coordinates: 3760737..3762149 (+)
• Length: 470 a.a.
• NCBI ID: WP_239957935.1
• Uniprot ID: -
• Organism: Acinetobacter lactucae isolate nanjing
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 3755737..3767149

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM0O0_RS17600	thrC	3755989..3757128 (+)	1140	WP_002048893.1	threonine synthase	-
ACM0O0_RS17605	pbpG	3757239..3758285 (-)	1047	WP_016144106.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
ACM0O0_RS17610	-	3758498..3759133 (+)	636	WP_002121174.1	response regulator	-
ACM0O0_RS17615	pilS	3759144..3760712 (+)	1569	WP_416040766.1	sensor histidine kinase	Regulator
ACM0O0_RS17620	pilR	3760737..3762149 (+)	1413	WP_239957935.1	sigma-54-dependent transcriptional regulator	Regulator
ACM0O0_RS17625	-	3762153..3763337 (-)	1185	WP_416040767.1	S41 family peptidase	-
ACM0O0_RS17630	gpmI	3763353..3764900 (-)	1548	WP_016144102.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
ACM0O0_RS17635	lptG	3765027..3766097 (-)	1071	WP_016144101.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 470 a.a.
• Molecular weight: 52699.86 Da
• Isoelectric Point: 6.4509

>NTDB_id=1097483 ACM0O0_RS17620 WP_239957935.1 3760737..3762149(+) (pilR) [Acinetobacter lactucae isolate nanjing]
MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFTQFHYDACLTDLNLPDGSGLELVKHVSQTYPHTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPINQIHLDQLLKKALNQPKPEHEFGETTLENDLLIGRSPPIQNLRTAIKKIARS
QAPVFVTGESGTGKEVVANLIHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLTMQVKLLRAVQEKKIRPLGSDQEIDVDFRVISASHQDLDVLVQQGKFRQDLFFRIHVMDIMLPPLRDRGGDILL
LANHFIQKVCTEWGISSKQLTACAETYLLQQDFPGNVRELRNMIERAITLSDDECIDLTHLAPPLRGSSVSPQIVTKQLN
QTPNVQTHPKFPMEGLERYLENIEKDILLNALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTEMGEEV

Nucleotide

• Length: 1413 bp

>NTDB_id=1097483 ACM0O0_RS17620 WP_239957935.1 3760737..3762149(+) (pilR) [Acinetobacter lactucae isolate nanjing]
ATGGCAGAACAGCAACCACTCGTTTTGCTTGTAGACGATGAAGAAGATTTATGCCTGTTAATGCAAATGACTCTTGCACG
AATGGGGATTAAGACACATCTTGCTTATCGGGTTGAACAGGCCAAACAGCTCTTTACTCAGTTTCATTACGATGCATGCT
TGACCGATTTAAATCTACCTGACGGTAGTGGTTTAGAATTGGTTAAACATGTTTCTCAAACTTACCCACACACACCCATT
GCAGTTTTAACTGCATACGGAAATATGGACATTGCAATTGCTGCATTAAAAGCGGGAGCTTTTGATTTTGTCAGCAAACC
GATTAACCAAATTCATTTAGATCAGTTGTTAAAAAAGGCGCTTAACCAGCCAAAACCAGAGCATGAGTTTGGTGAAACAA
CATTAGAAAATGACTTATTAATTGGGCGTTCACCACCTATACAAAACTTACGGACAGCTATTAAAAAAATAGCCCGCTCC
CAAGCGCCTGTATTTGTTACAGGCGAGTCTGGTACGGGTAAAGAAGTTGTTGCCAATCTTATTCACCGCTTAAGCAACCG
CAGTGAAGGACCATTTATTGCAATTAACTGTGGAGCAATCCCAACTGAGCTCATGGAAAGTGAACTTTTCGGGCATAAAA
AAGGGAGCTTTACTGGCGCGACTCAAGACAAACAAGGTCTTATTTTATCGGCACACGGCGGCAGTTTATTTTTAGATGAA
ATTGCCGAATTGCCGTTAACCATGCAAGTTAAATTGCTTCGCGCAGTACAAGAGAAAAAAATTCGCCCACTAGGTTCTGA
TCAGGAAATTGATGTTGATTTTCGAGTAATTAGTGCGAGTCACCAAGATTTAGATGTGTTAGTCCAACAAGGTAAATTCC
GTCAGGACTTATTTTTCCGTATTCATGTTATGGATATTATGTTGCCGCCACTGCGTGACCGTGGTGGAGATATTTTGCTA
TTGGCCAACCATTTTATTCAAAAGGTTTGTACGGAATGGGGAATTTCAAGCAAGCAATTAACGGCGTGTGCTGAAACTTA
TTTATTACAGCAAGACTTTCCGGGTAATGTGCGTGAATTAAGAAATATGATTGAACGAGCTATTACTTTAAGTGATGATG
AATGTATTGATTTAACACATTTAGCACCTCCTCTTAGAGGTAGTAGTGTGAGCCCGCAAATCGTAACGAAACAATTAAAT
CAAACACCAAATGTTCAGACTCATCCAAAATTTCCAATGGAAGGTTTAGAACGCTACTTAGAAAATATCGAAAAAGATAT
TTTACTGAATGCATTAAATATGACGCATTGGAATCGAACTTTGGCAGCTAAAAAGCTGGGAATGACATTCCGTTCTTTGC
GCTATCGACTCAAAAAATTTGGCTTAGATACCGAAATGGGAGAGGAAGTATAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (420-460)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

• Response regulator receiver domain (Response_reg) (8-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	85.412	100	0.86
pilR	Pseudomonas aeruginosa PAK	50.877	97.021	0.494