Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   ABWV75_RS04795 Genome accession   NZ_AP031487
Coordinates   948219..949253 (+) Length   344 a.a.
NCBI ID   WP_049415634.1    Uniprot ID   A0A974KWJ9
Organism   Staphylococcus hominis subsp. novobiosepticus strain NBRC 113928     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 943219..954253
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABWV75_RS04770 (SKB0068_09390) - 943909..944898 (-) 990 WP_049438092.1 aromatic acid exporter family protein -
  ABWV75_RS04775 (SKB0068_09400) map 945072..945824 (+) 753 WP_002450057.1 type I methionyl aminopeptidase -
  ABWV75_RS04780 (SKB0068_09410) - 945873..946883 (-) 1011 WP_087436993.1 HoxN/HupN/NixA family nickel/cobalt transporter -
  ABWV75_RS04785 (SKB0068_09420) - 947114..947500 (+) 387 WP_087436992.1 hypothetical protein -
  ABWV75_RS04790 (SKB0068_09430) liaF 947521..948222 (+) 702 WP_087436991.1 cell wall-active antibiotics response protein LiaF -
  ABWV75_RS04795 (SKB0068_09440) vraS 948219..949253 (+) 1035 WP_049415634.1 sensor histidine kinase Regulator
  ABWV75_RS04800 (SKB0068_09450) vraR 949255..949884 (+) 630 WP_002450048.1 two-component system response regulator VraR Regulator
  ABWV75_RS04805 (SKB0068_09460) - 949964..951172 (-) 1209 WP_242267842.1 YihY/virulence factor BrkB family protein -
  ABWV75_RS04810 (SKB0068_09470) - 951264..951545 (-) 282 WP_002450075.1 hypothetical protein -
  ABWV75_RS04815 (SKB0068_09480) - 951551..952015 (-) 465 WP_002455129.1 low molecular weight protein-tyrosine-phosphatase -
  ABWV75_RS04820 (SKB0068_09490) - 952157..952363 (+) 207 WP_353318732.1 DUF1128 domain-containing protein -
  ABWV75_RS04825 (SKB0068_09500) - 952375..953622 (+) 1248 WP_353318733.1 aminopeptidase -
  ABWV75_RS04830 (SKB0068_09510) - 953655..954188 (+) 534 WP_087436988.1 acyl-CoA thioesterase -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 39629.22 Da        Isoelectric Point: 6.3137

>NTDB_id=109737 ABWV75_RS04795 WP_049415634.1 948219..949253(+) (vraS) [Staphylococcus hominis subsp. novobiosepticus strain NBRC 113928]
MNHYLRAIGSMLILVYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLVIILLCIIVGSVLAYKINQQNDWIKN
QIEHAIEGETVGINDKNIELYNETIDIYQMLVPLNQELQKLRIKTQNLTNENYNMNDIKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETELAPPLNQQIPVLEKMIQESQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVIYDI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNHQDYLLLRIQDNGKGFNVDEKVEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLTKEEG

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=109737 ABWV75_RS04795 WP_049415634.1 948219..949253(+) (vraS) [Staphylococcus hominis subsp. novobiosepticus strain NBRC 113928]
ATGAATCACTATTTAAGAGCAATAGGATCCATGCTTATTTTAGTGTATAGCATGTTAACTGCGTTTTTATTTATAGATAA
AGTTTTTGTAAATATTATATATTTTCAAGGAATGTTCTATACTCAAATATTTGGTATACCTGTGTTTCTATTTCTTAATT
TAGTGATTATTTTACTTTGTATTATCGTTGGCTCTGTATTAGCTTATAAAATAAATCAGCAAAATGATTGGATAAAGAAT
CAAATTGAACATGCCATTGAAGGCGAAACGGTAGGGATTAATGATAAAAATATAGAACTATATAATGAGACAATTGATAT
TTATCAAATGTTAGTGCCTTTAAATCAAGAATTACAGAAATTAAGAATTAAAACTCAAAATTTAACAAATGAAAACTATA
ATATGAATGACATTAAAGTTAAAAAAATCATAGAAGACGAGCGTCAGCGTTTAGCAAGGGAACTACACGATTCAGTAAGT
CAACAACTTTTCGCAGCAAGTATGATGCTATCAGCGATAAAAGAAACAGAACTAGCACCACCTCTTAATCAACAAATTCC
AGTACTTGAGAAAATGATACAAGAATCTCAATTAGAGATGCGAGCGCTATTACTACATTTGCGACCTTTAGGACTCAAAG
ATAAATCATTAGGGGAAGGTATTAAAGATTTAGTCATTGATTTACAAAAGAAAGTACCTATGAAAGTCATTTATGATATA
CAAGATTTTAAAGTTCCTAAAGGAATTGAAGATCATCTATTTCGAATTACACAAGAGGCAATTTCAAATACATTAAGACA
TTCTAATGGAACTAAAGTGACAGTAGAATTATTTAATCATCAAGATTATTTATTATTAAGAATTCAGGATAATGGTAAAG
GTTTTAACGTAGATGAAAAAGTAGAACAAAGTTATGGATTGAAAAATATGAGAGAACGTGCATTAGAAATAGGTGCAACG
TTTCATATCGTATCTTTACCAGATTCAGGAACTAGAATAGAGGTAAAAGCACCTTTAACGAAAGAGGAGGGTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

90.116

100

0.901


Multiple sequence alignment