Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | ACL43R_RS02415 | Genome accession | NZ_CP180647 |
| Coordinates | 491718..493523 (+) | Length | 601 a.a. |
| NCBI ID | WP_416037676.1 | Uniprot ID | - |
| Organism | Lactococcus formosensis strain JAL11 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 486718..498523
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACL43R_RS02395 (ACL43R_02395) | - | 486866..487690 (-) | 825 | WP_165711384.1 | HAD family hydrolase | - |
| ACL43R_RS02400 (ACL43R_02400) | - | 488053..489474 (+) | 1422 | WP_017368901.1 | NCS2 family permease | - |
| ACL43R_RS02405 (ACL43R_02405) | - | 489552..490652 (+) | 1101 | WP_213432063.1 | YdcF family protein | - |
| ACL43R_RS02410 (ACL43R_02410) | coiA | 490730..491734 (+) | 1005 | WP_416037675.1 | competence protein CoiA | Machinery gene |
| ACL43R_RS02415 (ACL43R_02415) | pepF | 491718..493523 (+) | 1806 | WP_416037676.1 | oligoendopeptidase F | Regulator |
| ACL43R_RS02420 (ACL43R_02420) | - | 493523..494206 (+) | 684 | WP_416037677.1 | O-methyltransferase | - |
| ACL43R_RS02425 (ACL43R_02425) | - | 494304..495212 (+) | 909 | WP_416037678.1 | peptidyl-prolyl cis-trans isomerase | - |
| ACL43R_RS02430 (ACL43R_02430) | alaS | 495463..498081 (+) | 2619 | WP_017368907.1 | alanine--tRNA ligase | - |
Sequence
Protein
Download Length: 601 a.a. Molecular weight: 69818.20 Da Isoelectric Point: 4.5634
>NTDB_id=1097150 ACL43R_RS02415 WP_416037676.1 491718..493523(+) (pepF) [Lactococcus formosensis strain JAL11]
MAKKRDEIAENLTWDLSTVFENDAAWELELKSVSEKLETVNRYEGHLLDSAQSLLEITEVELEISRAVEKVYVYASMKHD
QDTQVSRYQEYDARATNLYAKFGEMFAFYEPEFLALTPERYESFRREEPKLEQYSHMFERLFAKKEHILSPKEEKLLAGA
SEIFGAAAETFEIFDNADIELPMIKDEKGQEVQLTHGNYISFMESKDRHVRKAAYQALYSNYEQYQHTYAKTLQTNVKVH
NFKAKTRGYDSARQAALSSNFIPEEVYDRLLESVNKYLPLLHRYIKLREQILGLDDDLKMYDVYTPLSDLDYKFNYPEAV
EKAEEVLQVFGPEYAAHVKKAFDERWIDVAENIGKRSGAYSGGCYDTNAFMLLNWQETLDDLFTLVHEMGHSMHSTFTRE
NQPYVYGDYPIFLAEIASTTNENILTESLLAETTDEKERFAILNHWLDGFRGTVFRQSQFAEFEHEIHKAEQEGKVLTSE
FMNQLYAGLNEKYYGLPALENPEIQYEWARIPHFYYNYYVFQYATGFAAATYLAEAIVNGGSEAREKYLTYLKAGSSDYP
LAVIAQAGVDMEEITYLESAFAVFEKRLIELENLVEKGVHL
MAKKRDEIAENLTWDLSTVFENDAAWELELKSVSEKLETVNRYEGHLLDSAQSLLEITEVELEISRAVEKVYVYASMKHD
QDTQVSRYQEYDARATNLYAKFGEMFAFYEPEFLALTPERYESFRREEPKLEQYSHMFERLFAKKEHILSPKEEKLLAGA
SEIFGAAAETFEIFDNADIELPMIKDEKGQEVQLTHGNYISFMESKDRHVRKAAYQALYSNYEQYQHTYAKTLQTNVKVH
NFKAKTRGYDSARQAALSSNFIPEEVYDRLLESVNKYLPLLHRYIKLREQILGLDDDLKMYDVYTPLSDLDYKFNYPEAV
EKAEEVLQVFGPEYAAHVKKAFDERWIDVAENIGKRSGAYSGGCYDTNAFMLLNWQETLDDLFTLVHEMGHSMHSTFTRE
NQPYVYGDYPIFLAEIASTTNENILTESLLAETTDEKERFAILNHWLDGFRGTVFRQSQFAEFEHEIHKAEQEGKVLTSE
FMNQLYAGLNEKYYGLPALENPEIQYEWARIPHFYYNYYVFQYATGFAAATYLAEAIVNGGSEAREKYLTYLKAGSSDYP
LAVIAQAGVDMEEITYLESAFAVFEKRLIELENLVEKGVHL
Nucleotide
Download Length: 1806 bp
>NTDB_id=1097150 ACL43R_RS02415 WP_416037676.1 491718..493523(+) (pepF) [Lactococcus formosensis strain JAL11]
ATGGCAAAAAAACGTGATGAAATAGCTGAAAACTTAACTTGGGATTTGTCAACCGTATTTGAAAATGATGCCGCCTGGGA
ACTTGAACTTAAAAGTGTCTCGGAAAAGTTAGAGACGGTAAACCGCTACGAAGGACATCTTTTAGATAGTGCTCAAAGCT
TGTTAGAAATCACGGAAGTTGAGCTAGAGATTTCGCGTGCTGTGGAAAAGGTTTATGTTTATGCTTCAATGAAGCATGAT
CAAGATACGCAAGTGAGTCGTTACCAAGAATATGATGCTAGAGCTACAAATTTATATGCTAAGTTTGGTGAAATGTTTGC
CTTTTATGAGCCTGAATTTTTAGCTTTAACGCCAGAACGTTATGAGAGTTTTAGAAGAGAAGAGCCCAAGTTGGAACAGT
ATTCTCATATGTTTGAACGCCTTTTTGCTAAAAAAGAGCATATTTTAAGTCCAAAAGAGGAAAAACTGTTAGCCGGTGCC
AGTGAGATTTTTGGTGCAGCTGCCGAAACTTTCGAAATTTTTGATAATGCTGATATTGAGCTTCCGATGATTAAAGATGA
AAAAGGGCAGGAAGTACAGCTGACACATGGTAATTATATCTCGTTCATGGAAAGTAAGGACCGTCATGTGCGAAAGGCAG
CTTATCAAGCCCTTTATAGTAACTATGAACAGTATCAGCACACTTATGCTAAAACGCTACAAACAAATGTAAAAGTCCAT
AATTTTAAGGCGAAGACACGTGGGTATGATTCAGCCCGTCAAGCAGCTTTATCAAGTAATTTTATTCCGGAAGAAGTTTA
CGATAGGCTTTTGGAGTCGGTTAATAAATATTTGCCTCTTTTACATCGTTATATCAAATTACGCGAGCAAATTTTAGGTT
TAGATGATGATTTGAAGATGTATGATGTCTACACACCCTTATCTGACTTGGATTATAAGTTTAACTATCCAGAAGCAGTA
GAGAAAGCAGAAGAAGTTCTTCAAGTTTTCGGCCCTGAGTATGCAGCACATGTTAAAAAAGCTTTTGATGAGCGTTGGAT
TGATGTAGCAGAAAATATTGGCAAACGTTCTGGCGCATACTCGGGAGGATGCTATGATACAAATGCCTTTATGCTCTTAA
ACTGGCAAGAAACTTTGGATGATTTGTTTACCTTAGTTCATGAAATGGGACACAGTATGCATTCTACATTTACACGAGAA
AATCAACCTTATGTTTATGGGGATTATCCAATCTTTCTTGCAGAAATTGCCTCAACAACCAATGAAAATATCTTGACGGA
AAGTTTACTTGCGGAGACGACAGATGAAAAAGAGCGTTTTGCCATTTTAAACCACTGGCTTGATGGCTTCCGGGGAACCG
TTTTTCGTCAAAGCCAATTTGCTGAATTTGAACATGAAATTCATAAAGCTGAGCAAGAAGGAAAAGTCCTAACCAGTGAA
TTCATGAACCAGCTCTACGCAGGTCTTAATGAGAAGTATTATGGTTTGCCTGCTCTAGAAAATCCTGAAATTCAGTACGA
GTGGGCACGCATTCCGCATTTTTATTATAATTATTATGTTTTCCAATATGCAACAGGCTTTGCAGCAGCAACTTATCTTG
CAGAGGCTATCGTAAATGGTGGATCAGAAGCGCGTGAAAAATACCTCACTTATCTCAAAGCTGGATCAAGTGATTATCCG
CTGGCTGTGATTGCTCAAGCAGGTGTAGATATGGAAGAAATAACGTATTTAGAATCGGCTTTTGCTGTTTTTGAAAAACG
TTTAATTGAGCTGGAAAATTTAGTCGAAAAAGGAGTCCATTTATAA
ATGGCAAAAAAACGTGATGAAATAGCTGAAAACTTAACTTGGGATTTGTCAACCGTATTTGAAAATGATGCCGCCTGGGA
ACTTGAACTTAAAAGTGTCTCGGAAAAGTTAGAGACGGTAAACCGCTACGAAGGACATCTTTTAGATAGTGCTCAAAGCT
TGTTAGAAATCACGGAAGTTGAGCTAGAGATTTCGCGTGCTGTGGAAAAGGTTTATGTTTATGCTTCAATGAAGCATGAT
CAAGATACGCAAGTGAGTCGTTACCAAGAATATGATGCTAGAGCTACAAATTTATATGCTAAGTTTGGTGAAATGTTTGC
CTTTTATGAGCCTGAATTTTTAGCTTTAACGCCAGAACGTTATGAGAGTTTTAGAAGAGAAGAGCCCAAGTTGGAACAGT
ATTCTCATATGTTTGAACGCCTTTTTGCTAAAAAAGAGCATATTTTAAGTCCAAAAGAGGAAAAACTGTTAGCCGGTGCC
AGTGAGATTTTTGGTGCAGCTGCCGAAACTTTCGAAATTTTTGATAATGCTGATATTGAGCTTCCGATGATTAAAGATGA
AAAAGGGCAGGAAGTACAGCTGACACATGGTAATTATATCTCGTTCATGGAAAGTAAGGACCGTCATGTGCGAAAGGCAG
CTTATCAAGCCCTTTATAGTAACTATGAACAGTATCAGCACACTTATGCTAAAACGCTACAAACAAATGTAAAAGTCCAT
AATTTTAAGGCGAAGACACGTGGGTATGATTCAGCCCGTCAAGCAGCTTTATCAAGTAATTTTATTCCGGAAGAAGTTTA
CGATAGGCTTTTGGAGTCGGTTAATAAATATTTGCCTCTTTTACATCGTTATATCAAATTACGCGAGCAAATTTTAGGTT
TAGATGATGATTTGAAGATGTATGATGTCTACACACCCTTATCTGACTTGGATTATAAGTTTAACTATCCAGAAGCAGTA
GAGAAAGCAGAAGAAGTTCTTCAAGTTTTCGGCCCTGAGTATGCAGCACATGTTAAAAAAGCTTTTGATGAGCGTTGGAT
TGATGTAGCAGAAAATATTGGCAAACGTTCTGGCGCATACTCGGGAGGATGCTATGATACAAATGCCTTTATGCTCTTAA
ACTGGCAAGAAACTTTGGATGATTTGTTTACCTTAGTTCATGAAATGGGACACAGTATGCATTCTACATTTACACGAGAA
AATCAACCTTATGTTTATGGGGATTATCCAATCTTTCTTGCAGAAATTGCCTCAACAACCAATGAAAATATCTTGACGGA
AAGTTTACTTGCGGAGACGACAGATGAAAAAGAGCGTTTTGCCATTTTAAACCACTGGCTTGATGGCTTCCGGGGAACCG
TTTTTCGTCAAAGCCAATTTGCTGAATTTGAACATGAAATTCATAAAGCTGAGCAAGAAGGAAAAGTCCTAACCAGTGAA
TTCATGAACCAGCTCTACGCAGGTCTTAATGAGAAGTATTATGGTTTGCCTGCTCTAGAAAATCCTGAAATTCAGTACGA
GTGGGCACGCATTCCGCATTTTTATTATAATTATTATGTTTTCCAATATGCAACAGGCTTTGCAGCAGCAACTTATCTTG
CAGAGGCTATCGTAAATGGTGGATCAGAAGCGCGTGAAAAATACCTCACTTATCTCAAAGCTGGATCAAGTGATTATCCG
CTGGCTGTGATTGCTCAAGCAGGTGTAGATATGGAAGAAATAACGTATTTAGAATCGGCTTTTGCTGTTTTTGAAAAACG
TTTAATTGAGCTGGAAAATTTAGTCGAAAAAGGAGTCCATTTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
64.892 |
100 |
0.649 |