Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   ACK2OW_RS13195 Genome accession   NZ_CP180575
Coordinates   2460542..2460733 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain K3C     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context


Location: 2455542..2465733
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2OW_RS13165 (ACK2OW_13165) argF 2456406..2457365 (+) 960 WP_014476421.1 ornithine carbamoyltransferase -
  ACK2OW_RS13170 (ACK2OW_13170) yjzC 2457451..2457630 (+) 180 WP_003245356.1 YjzC family protein -
  ACK2OW_RS13175 (ACK2OW_13175) yjzD 2457676..2457861 (-) 186 WP_003245236.1 YjzD family protein -
  ACK2OW_RS13180 (ACK2OW_13180) - 2458110..2458844 (+) 735 WP_003245223.1 hypothetical protein -
  ACK2OW_RS13185 (ACK2OW_13185) - 2458926..2459483 (+) 558 WP_021479559.1 hypothetical protein -
  ACK2OW_RS13190 (ACK2OW_13190) med 2459574..2460527 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  ACK2OW_RS13195 (ACK2OW_13195) comZ 2460542..2460733 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  ACK2OW_RS13200 (ACK2OW_13200) yjzB 2460763..2460990 (-) 228 WP_120027973.1 spore coat protein YjzB -
  ACK2OW_RS13205 (ACK2OW_13205) fabH 2461155..2462093 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  ACK2OW_RS13210 (ACK2OW_13210) fabF 2462116..2463357 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  ACK2OW_RS13215 (ACK2OW_13215) yjaZ 2463433..2464218 (+) 786 WP_021479557.1 DUF2268 domain-containing protein -
  ACK2OW_RS13220 (ACK2OW_13220) appD 2464410..2465396 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=1096791 ACK2OW_RS13195 WP_003224559.1 2460542..2460733(+) (comZ) [Bacillus subtilis strain K3C]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1096791 ACK2OW_RS13195 WP_003224559.1 2460542..2460733(+) (comZ) [Bacillus subtilis strain K3C]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains


Predicted by InterproScan.

(4-58)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment