Detailed information NTG1096790

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ACK2OW_RS13190
• Genome accession: NZ_CP180575
• Coordinates: 2459574..2460527 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain K3C
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 2454574..2465527

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK2OW_RS13165 (ACK2OW_13165)	argF	2456406..2457365 (+)	960	WP_014476421.1	ornithine carbamoyltransferase	-
ACK2OW_RS13170 (ACK2OW_13170)	yjzC	2457451..2457630 (+)	180	WP_003245356.1	YjzC family protein	-
ACK2OW_RS13175 (ACK2OW_13175)	yjzD	2457676..2457861 (-)	186	WP_003245236.1	YjzD family protein	-
ACK2OW_RS13180 (ACK2OW_13180)	-	2458110..2458844 (+)	735	WP_003245223.1	hypothetical protein	-
ACK2OW_RS13185 (ACK2OW_13185)	-	2458926..2459483 (+)	558	WP_021479559.1	hypothetical protein	-
ACK2OW_RS13190 (ACK2OW_13190)	med	2459574..2460527 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
ACK2OW_RS13195 (ACK2OW_13195)	comZ	2460542..2460733 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
ACK2OW_RS13200 (ACK2OW_13200)	yjzB	2460763..2460990 (-)	228	WP_120027973.1	spore coat protein YjzB	-
ACK2OW_RS13205 (ACK2OW_13205)	fabH	2461155..2462093 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
ACK2OW_RS13210 (ACK2OW_13210)	fabF	2462116..2463357 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
ACK2OW_RS13215 (ACK2OW_13215)	yjaZ	2463433..2464218 (+)	786	WP_021479557.1	DUF2268 domain-containing protein	-
ACK2OW_RS13220 (ACK2OW_13220)	appD	2464410..2465396 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=1096790 ACK2OW_RS13190 WP_014476425.1 2459574..2460527(+) (med) [Bacillus subtilis strain K3C]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=1096790 ACK2OW_RS13190 WP_014476425.1 2459574..2460527(+) (med) [Bacillus subtilis strain K3C]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCCTCCTTTACGTGGCAG
CCTGAGGTTGATGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAACAAAGG
CACCCTTGAGGGCGGCGACCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGGACATTCAGCCCGCTCGTCGATA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAATAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997