Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | ACK2OW_RS03310 | Genome accession | NZ_CP180575 |
| Coordinates | 564719..565054 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain K3C | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 559719..570054
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACK2OW_RS03290 (ACK2OW_03290) | gcvT | 560310..561398 (-) | 1089 | WP_038829737.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ACK2OW_RS03295 (ACK2OW_03295) | hepAA | 561840..563513 (+) | 1674 | WP_032726152.1 | DEAD/DEAH box helicase | - |
| ACK2OW_RS03300 (ACK2OW_03300) | yqhG | 563534..564328 (+) | 795 | WP_032726154.1 | YqhG family protein | - |
| ACK2OW_RS03305 (ACK2OW_03305) | sinI | 564512..564685 (+) | 174 | WP_014477323.1 | anti-repressor SinI | Regulator |
| ACK2OW_RS03310 (ACK2OW_03310) | sinR | 564719..565054 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| ACK2OW_RS03315 (ACK2OW_03315) | tasA | 565146..565931 (-) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| ACK2OW_RS03320 (ACK2OW_03320) | sipW | 565996..566568 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| ACK2OW_RS03325 (ACK2OW_03325) | tapA | 566552..567313 (-) | 762 | WP_032726156.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ACK2OW_RS03330 (ACK2OW_03330) | yqzG | 567584..567910 (+) | 327 | WP_021480018.1 | YqzG/YhdC family protein | - |
| ACK2OW_RS03335 (ACK2OW_03335) | spoIITA | 567952..568131 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| ACK2OW_RS03340 (ACK2OW_03340) | comGG | 568203..568577 (-) | 375 | WP_032726157.1 | ComG operon protein ComGG | Machinery gene |
| ACK2OW_RS03345 (ACK2OW_03345) | comGF | 568578..568961 (-) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| ACK2OW_RS03350 (ACK2OW_03350) | comGE | 568987..569334 (-) | 348 | WP_021480020.1 | ComG operon protein 5 | Machinery gene |
| ACK2OW_RS03355 (ACK2OW_03355) | comGD | 569318..569749 (-) | 432 | WP_032726159.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACK2OW_RS03360 (ACK2OW_03360) | comGC | 569739..570035 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=1096743 ACK2OW_RS03310 WP_003226345.1 564719..565054(+) (sinR) [Bacillus subtilis strain K3C]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=1096743 ACK2OW_RS03310 WP_003226345.1 564719..565054(+) (sinR) [Bacillus subtilis strain K3C]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |