Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   ACK2OW_RS03125 Genome accession   NZ_CP180575
Coordinates   532584..534314 (-) Length   576 a.a.
NCBI ID   WP_017696435.1    Uniprot ID   A0AAP2M4B1
Organism   Bacillus subtilis strain K3C     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 527584..539314
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2OW_RS03100 (ACK2OW_03100) yqiH 527641..527934 (-) 294 WP_003230284.1 lipoprotein -
  ACK2OW_RS03105 (ACK2OW_03105) - 528242..528394 (+) 153 WP_014480226.1 hypothetical protein -
  ACK2OW_RS03110 (ACK2OW_03110) yqiG 528467..529585 (+) 1119 WP_416042542.1 NADH-dependent flavin oxidoreductase -
  ACK2OW_RS03115 (ACK2OW_03115) spo0A 530050..530853 (-) 804 WP_032726121.1 sporulation transcription factor Spo0A Regulator
  ACK2OW_RS03120 (ACK2OW_03120) spoIVB 531129..532409 (-) 1281 WP_077671426.1 SpoIVB peptidase -
  ACK2OW_RS03125 (ACK2OW_03125) recN 532584..534314 (-) 1731 WP_017696435.1 DNA repair protein RecN Machinery gene
  ACK2OW_RS03130 (ACK2OW_03130) argR 534349..534798 (-) 450 WP_014114358.1 arginine repressor ArgR -
  ACK2OW_RS03135 (ACK2OW_03135) yqxC 534896..535741 (-) 846 WP_003230264.1 TlyA family RNA methyltransferase -
  ACK2OW_RS03140 (ACK2OW_03140) dxs 535738..537639 (-) 1902 WP_015384069.1 1-deoxy-D-xylulose-5-phosphate synthase -
  ACK2OW_RS03145 (ACK2OW_03145) ispA 537814..538704 (-) 891 WP_032726127.1 polyprenyl synthetase family protein -
  ACK2OW_RS03150 (ACK2OW_03150) xseB 538694..538948 (-) 255 WP_003226409.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 576 a.a.        Molecular weight: 64523.37 Da        Isoelectric Point: 4.7429

>NTDB_id=1096741 ACK2OW_RS03125 WP_017696435.1 532584..534314(-) (recN) [Bacillus subtilis strain K3C]
MLAELSIKNFAIIEELTVSFERGLTVLTGETGAGKSIIIDAISLLVGGRGSSEFVRYGEAKAELEGLFLLESGHPVLGVC
AEQGIDVSDEMIVMRRDISTSGKSVCRVNGKLVTIASLREIGRLLLDIHGQHDNQLLMEDENHLQLLDKFAGAEVESALK
TYQEGYQRYMKLLKKLKQLSESEQEMAHRLDLIQFQLEEIESAKLELNEDEQLQEERQEISNFEKIYESLQNAYNALRSE
QGGLDWVGMASAQLEDISDINEPLKKLSESVSNSYYLLEDATFQMRNMLDELEFDPERLNYIETRLNEIKQLKRKYGATV
EDILEYASKIEEEIDQIENRDSHLQSLKKELDSVGKDVAVEAANVSQIRKTWAKKLADEIHRELKSLYMEKSTFDTEFKV
RTASRNEEAPLVNGQPVQLTEQGIDLVKFLISTNTGEPLKSLSKVASGGELSRVMLAIKSIFSSQQDVTSIIFDEVDTGV
SGRVAQAIAEKIHKVSIGSQVLCITHLPQVAAMADTHLYIAKELKDGRTTTRVKPLSKQEKVAEIGRMIAGVEVTDLTKR
HAKELLKQADQVKTTG

Nucleotide


Download         Length: 1731 bp        

>NTDB_id=1096741 ACK2OW_RS03125 WP_017696435.1 532584..534314(-) (recN) [Bacillus subtilis strain K3C]
TTGTTAGCTGAACTATCGATTAAAAACTTTGCCATTATTGAGGAACTGACGGTTTCTTTTGAACGCGGGCTTACGGTTTT
AACAGGAGAAACCGGAGCCGGCAAATCCATTATCATAGATGCCATTTCTCTTTTAGTCGGAGGCCGCGGATCATCTGAAT
TTGTTAGATATGGGGAAGCAAAAGCCGAACTTGAAGGGCTGTTTCTGTTGGAGAGCGGCCATCCTGTTTTAGGCGTATGC
GCTGAGCAGGGAATCGACGTTTCAGACGAAATGATCGTCATGAGAAGGGATATCAGCACGAGCGGGAAAAGCGTTTGCCG
TGTCAATGGCAAGCTTGTCACGATTGCTTCGCTAAGAGAGATCGGCAGGCTTTTGTTAGATATTCACGGACAGCACGATA
ACCAGCTGTTAATGGAAGACGAAAATCATCTCCAGCTTTTGGACAAGTTTGCCGGGGCCGAAGTGGAAAGCGCGCTCAAA
ACGTATCAGGAAGGGTACCAGCGGTATATGAAGCTGCTCAAAAAGCTTAAGCAGCTTTCTGAAAGCGAACAGGAAATGGC
CCATCGTCTTGATCTTATTCAATTTCAGCTCGAAGAAATCGAATCGGCAAAGCTTGAGCTTAACGAAGATGAACAGCTCC
AAGAAGAGCGCCAGGAAATTTCAAACTTTGAGAAGATATATGAATCGCTGCAAAATGCATATAACGCGCTTCGCAGTGAG
CAGGGCGGATTGGACTGGGTCGGAATGGCTTCAGCGCAGCTTGAAGATATCTCTGATATTAACGAACCGCTGAAAAAACT
GTCTGAAAGTGTTTCGAACTCCTACTATTTGCTTGAGGATGCCACATTTCAGATGAGAAATATGCTGGATGAGCTTGAAT
TTGATCCGGAACGCCTGAACTATATTGAGACACGACTTAATGAAATCAAACAGCTGAAACGAAAATACGGTGCCACTGTT
GAAGACATTTTGGAATATGCTTCTAAAATTGAAGAAGAGATTGACCAAATTGAAAACAGGGACAGCCACCTTCAAAGCTT
GAAAAAGGAGCTTGACTCCGTCGGCAAAGATGTCGCAGTGGAAGCGGCAAATGTGTCACAAATCCGAAAAACATGGGCGA
AAAAGCTGGCTGATGAGATTCATCGGGAATTAAAAAGCCTGTACATGGAAAAATCAACTTTCGATACGGAATTTAAGGTC
AGAACAGCGTCACGCAATGAAGAGGCGCCGCTTGTAAACGGCCAGCCCGTTCAGCTGACTGAACAAGGGATTGACCTGGT
GAAGTTTTTAATTTCAACCAATACAGGCGAGCCGCTGAAATCCCTTTCGAAAGTCGCTTCAGGTGGAGAGCTGTCACGGG
TGATGCTTGCCATAAAAAGCATTTTCTCCTCACAACAGGATGTGACATCGATCATTTTTGACGAGGTTGATACCGGTGTA
AGCGGCAGGGTCGCACAGGCAATCGCTGAGAAGATCCATAAGGTGTCAATAGGTTCACAAGTGCTGTGCATTACACACCT
GCCTCAGGTGGCTGCCATGGCCGATACGCATCTTTATATTGCGAAGGAGTTAAAAGACGGCAGAACGACGACACGTGTCA
AGCCGCTCTCTAAGCAGGAAAAGGTAGCGGAAATCGGGCGCATGATTGCAGGTGTCGAAGTAACCGACTTAACGAAACGC
CATGCGAAAGAACTTTTAAAACAAGCGGATCAAGTCAAAACAACTGGGTAA

Domains

Predicted by InterproScan.

AAA domain (AAA_23)

(4-230)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

99.479

100

0.995

Multiple sequence alignment