Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   ACK2OW_RS03115 Genome accession   NZ_CP180575
Coordinates   530050..530853 (-) Length   267 a.a.
NCBI ID   WP_032726121.1    Uniprot ID   -
Organism   Bacillus subtilis strain K3C     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 525050..535853
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2OW_RS03090 (ACK2OW_03090) glpQB 526196..526927 (-) 732 WP_069703866.1 glycerophosphodiester phosphodiesterase -
  ACK2OW_RS03095 (ACK2OW_03095) yqiI 527006..527626 (-) 621 WP_077671425.1 N-acetylmuramoyl-L-alanine amidase family protein -
  ACK2OW_RS03100 (ACK2OW_03100) yqiH 527641..527934 (-) 294 WP_003230284.1 lipoprotein -
  ACK2OW_RS03105 (ACK2OW_03105) - 528242..528394 (+) 153 WP_014480226.1 hypothetical protein -
  ACK2OW_RS03110 (ACK2OW_03110) yqiG 528467..529585 (+) 1119 WP_416042542.1 NADH-dependent flavin oxidoreductase -
  ACK2OW_RS03115 (ACK2OW_03115) spo0A 530050..530853 (-) 804 WP_032726121.1 sporulation transcription factor Spo0A Regulator
  ACK2OW_RS03120 (ACK2OW_03120) spoIVB 531129..532409 (-) 1281 WP_077671426.1 SpoIVB peptidase -
  ACK2OW_RS03125 (ACK2OW_03125) recN 532584..534314 (-) 1731 WP_017696435.1 DNA repair protein RecN Machinery gene
  ACK2OW_RS03130 (ACK2OW_03130) argR 534349..534798 (-) 450 WP_014114358.1 arginine repressor ArgR -
  ACK2OW_RS03135 (ACK2OW_03135) yqxC 534896..535741 (-) 846 WP_003230264.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29677.16 Da        Isoelectric Point: 6.3909

>NTDB_id=1096740 ACK2OW_RS03115 WP_032726121.1 530050..530853(-) (spo0A) [Bacillus subtilis strain K3C]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1096740 ACK2OW_RS03115 WP_032726121.1 530050..530853(-) (spo0A) [Bacillus subtilis strain K3C]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTAAGTGAATATATAGAAGGACAGGA
TGACATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATTTAGACGGACTTGCGGTTTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGACAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC
CATCATCTCAAAGCAGTATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCCCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTTAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGCCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCGTTGTTTGGTTATACTGTC
AGCATGACAAAAGCTAAACCGACAAATTCGGAATTCATTGCAATGGTTGCGGATAAGCTGAGATTAGAACATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

99.625

100

0.996

Multiple sequence alignment