Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ABWV32_RS03975 | Genome accession | NZ_AP031467 |
| Coordinates | 816884..817279 (+) | Length | 131 a.a. |
| NCBI ID | WP_002435780.1 | Uniprot ID | A0A7Z7YUN8 |
| Organism | Staphylococcus capitis strain NBRC 115779 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 811884..822279
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABWV32_RS03945 (SKB0123_08170) | atpD | 812102..813514 (+) | 1413 | WP_002435865.1 | F0F1 ATP synthase subunit beta | - |
| ABWV32_RS03950 (SKB0123_08180) | - | 813534..813938 (+) | 405 | WP_002453706.1 | F0F1 ATP synthase subunit epsilon | - |
| ABWV32_RS03955 (SKB0123_08190) | - | 814079..814312 (+) | 234 | WP_002453705.1 | DUF1146 family protein | - |
| ABWV32_RS03960 (SKB0123_08200) | murA | 814422..815687 (+) | 1266 | WP_002453704.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| ABWV32_RS03965 (SKB0123_08210) | fabZ | 815732..816169 (+) | 438 | WP_002435844.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| ABWV32_RS03970 (SKB0123_08220) | - | 816250..816693 (-) | 444 | WP_002453703.1 | YwpF-like family protein | - |
| ABWV32_RS03975 (SKB0123_08230) | ssb | 816884..817279 (+) | 396 | WP_002435780.1 | single-stranded DNA-binding protein | Machinery gene |
| ABWV32_RS03980 (SKB0123_08240) | - | 817674..818399 (+) | 726 | WP_002453702.1 | transglycosylase family protein | - |
| ABWV32_RS03985 (SKB0123_08250) | tenA | 818695..819390 (+) | 696 | WP_002453701.1 | thiaminase II | - |
| ABWV32_RS03990 (SKB0123_08260) | thiD | 819377..820198 (+) | 822 | WP_353304995.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ABWV32_RS03995 (SKB0123_08270) | thiM | 820191..820979 (+) | 789 | WP_002435520.1 | hydroxyethylthiazole kinase | - |
| ABWV32_RS04000 (SKB0123_08280) | thiE | 820986..821624 (+) | 639 | WP_353304996.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15145.02 Da Isoelectric Point: 5.2691
>NTDB_id=109669 ABWV32_RS03975 WP_002435780.1 816884..817279(+) (ssb) [Staphylococcus capitis strain NBRC 115779]
MLNKIVIVGRLTKDAQIYEKEDSKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
MLNKIVIVGRLTKDAQIYEKEDSKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
Nucleotide
Download Length: 396 bp
>NTDB_id=109669 ABWV32_RS03975 WP_002435780.1 816884..817279(+) (ssb) [Staphylococcus capitis strain NBRC 115779]
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAGTAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATTTAA
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAGTAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
76.336 |
100 |
0.763 |
| ssb | Staphylococcus aureus MW2 |
75.573 |
100 |
0.756 |