Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | HW03_RS18720 | Genome accession | NZ_CP008863 |
| Coordinates | 4054900..4055265 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain M37351 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4049900..4060265
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HW03_RS18690 (HW03_18885) | pyrR | 4050522..4051034 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| HW03_RS18695 (HW03_18890) | ruvX | 4051146..4051580 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| HW03_RS18700 (HW03_18895) | - | 4051580..4052149 (-) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| HW03_RS18705 (HW03_18900) | - | 4052198..4053091 (-) | 894 | WP_003084580.1 | TonB family protein | - |
| HW03_RS18710 (HW03_18905) | gshB | 4053238..4054191 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| HW03_RS18715 (HW03_18910) | pilG | 4054446..4054853 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| HW03_RS18720 (HW03_18915) | pilH | 4054900..4055265 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| HW03_RS18725 (HW03_18920) | - | 4055316..4055852 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| HW03_RS18730 (HW03_18925) | pilJ | 4055937..4057985 (+) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| HW03_RS18735 (HW03_18930) | pilK | 4058046..4058921 (+) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=109644 HW03_RS18720 WP_003084587.1 4054900..4055265(+) (pilH) [Pseudomonas aeruginosa strain M37351]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=109644 HW03_RS18720 WP_003084587.1 4054900..4055265(+) (pilH) [Pseudomonas aeruginosa strain M37351]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAGTTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCGCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAGTTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCGCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |