Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACLKMS_RS03645 | Genome accession | NZ_CP180533 |
| Coordinates | 783973..784368 (+) | Length | 131 a.a. |
| NCBI ID | WP_002457121.1 | Uniprot ID | A0A7H5C5S7 |
| Organism | Staphylococcus epidermidis strain BP21 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 778973..789368
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLKMS_RS03620 (ACLKMS_03620) | - | 780392..780796 (+) | 405 | WP_001829924.1 | F0F1 ATP synthase subunit epsilon | - |
| ACLKMS_RS03625 (ACLKMS_03625) | - | 780945..781178 (+) | 234 | WP_002456242.1 | DUF1146 family protein | - |
| ACLKMS_RS03630 (ACLKMS_03630) | murA | 781288..782553 (+) | 1266 | WP_151515989.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| ACLKMS_RS03635 (ACLKMS_03635) | fabZ | 782587..783024 (+) | 438 | WP_001829953.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| ACLKMS_RS03640 (ACLKMS_03640) | - | 783342..783782 (-) | 441 | WP_001829935.1 | YwpF-like family protein | - |
| ACLKMS_RS03645 (ACLKMS_03645) | ssb | 783973..784368 (+) | 396 | WP_002457121.1 | single-stranded DNA-binding protein | Machinery gene |
| ACLKMS_RS03650 (ACLKMS_03650) | - | 784756..785415 (+) | 660 | WP_001829904.1 | transglycosylase family protein | - |
| ACLKMS_RS03655 (ACLKMS_03655) | tenA | 785700..786389 (+) | 690 | WP_001829894.1 | thiaminase II | - |
| ACLKMS_RS03660 (ACLKMS_03660) | thiD | 786382..787203 (+) | 822 | WP_001832736.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACLKMS_RS03665 (ACLKMS_03665) | thiM | 787196..787984 (+) | 789 | WP_001829971.1 | hydroxyethylthiazole kinase | - |
| ACLKMS_RS03670 (ACLKMS_03670) | thiE | 787990..788628 (+) | 639 | WP_002505076.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15159.02 Da Isoelectric Point: 5.2661
>NTDB_id=1096263 ACLKMS_RS03645 WP_002457121.1 783973..784368(+) (ssb) [Staphylococcus epidermidis strain BP21]
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDNNEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDNNEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
Nucleotide
Download Length: 396 bp
>NTDB_id=1096263 ACLKMS_RS03645 WP_002457121.1 783973..784368(+) (ssb) [Staphylococcus epidermidis strain BP21]
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATCTATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATAATAATGAAATTTCTACAGATTATTTACTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATAAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATCTATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATAATAATGAAATTTCTACAGATTATTTACTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATAAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
74.046 |
100 |
0.74 |
| ssb | Staphylococcus aureus MW2 |
73.282 |
100 |
0.733 |