Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACMZ68_RS08025 | Genome accession | NZ_CP180522 |
| Coordinates | 1682734..1683114 (+) | Length | 126 a.a. |
| NCBI ID | WP_069123122.1 | Uniprot ID | - |
| Organism | Acinetobacter pittii strain AP5091 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1677734..1688114
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMZ68_RS07995 (ACMZ68_07995) | kdsB | 1678640..1679401 (+) | 762 | WP_415872065.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ACMZ68_RS08000 (ACMZ68_08000) | holB | 1679415..1680395 (+) | 981 | WP_415872066.1 | DNA polymerase III subunit delta' | - |
| ACMZ68_RS08005 (ACMZ68_08005) | pilZ | 1680406..1680747 (+) | 342 | WP_002121335.1 | PilZ domain-containing protein | - |
| ACMZ68_RS08010 (ACMZ68_08010) | ycfH | 1680765..1681538 (+) | 774 | WP_057070734.1 | TatD family hydrolase | - |
| ACMZ68_RS08015 (ACMZ68_08015) | - | 1681575..1682183 (+) | 609 | WP_014206595.1 | TetR/AcrR family transcriptional regulator | - |
| ACMZ68_RS08020 (ACMZ68_08020) | - | 1682190..1682744 (+) | 555 | WP_002121405.1 | type II secretion system protein | - |
| ACMZ68_RS08025 (ACMZ68_08025) | xcpV | 1682734..1683114 (+) | 381 | WP_069123122.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACMZ68_RS08030 (ACMZ68_08030) | xcpW | 1683114..1683815 (+) | 702 | WP_415872067.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACMZ68_RS08035 (ACMZ68_08035) | gspK | 1683816..1684775 (+) | 960 | WP_039761082.1 | type II secretion system minor pseudopilin GspK | - |
| ACMZ68_RS08040 (ACMZ68_08040) | - | 1685004..1685600 (+) | 597 | WP_415872068.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| ACMZ68_RS08045 (ACMZ68_08045) | ung | 1685654..1686367 (+) | 714 | WP_005069527.1 | uracil-DNA glycosylase | - |
| ACMZ68_RS08050 (ACMZ68_08050) | hibch | 1686364..1687488 (+) | 1125 | WP_415872069.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACMZ68_RS08055 (ACMZ68_08055) | tadA | 1687494..1687997 (+) | 504 | WP_002121378.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14003.19 Da Isoelectric Point: 9.4463
>NTDB_id=1096187 ACMZ68_RS08025 WP_069123122.1 1682734..1683114(+) (xcpV) [Acinetobacter pittii strain AP5091]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQNKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQNKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1096187 ACMZ68_RS08025 WP_069123122.1 1682734..1683114(+) (xcpV) [Acinetobacter pittii strain AP5091]
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTAGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACCAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAATAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTTGATTTGCAAATTAGCTTATATGATTCTGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTGTTTTTTAATTATCCAATGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTAGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACCAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAATAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTTGATTTGCAAATTAGCTTATATGATTCTGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTGTTTTTTAATTATCCAATGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
92.857 |
100 |
0.929 |