Detailed information NTG1096188

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACMZ68_RS08030
• Genome accession: NZ_CP180522
• Coordinates: 1683114..1683815 (+)
• Length: 233 a.a.
• NCBI ID: WP_415872067.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain AP5091
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1678114..1688815

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMZ68_RS07995 (ACMZ68_07995)	kdsB	1678640..1679401 (+)	762	WP_415872065.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACMZ68_RS08000 (ACMZ68_08000)	holB	1679415..1680395 (+)	981	WP_415872066.1	DNA polymerase III subunit delta'	-
ACMZ68_RS08005 (ACMZ68_08005)	pilZ	1680406..1680747 (+)	342	WP_002121335.1	PilZ domain-containing protein	-
ACMZ68_RS08010 (ACMZ68_08010)	ycfH	1680765..1681538 (+)	774	WP_057070734.1	TatD family hydrolase	-
ACMZ68_RS08015 (ACMZ68_08015)	-	1681575..1682183 (+)	609	WP_014206595.1	TetR/AcrR family transcriptional regulator	-
ACMZ68_RS08020 (ACMZ68_08020)	-	1682190..1682744 (+)	555	WP_002121405.1	type II secretion system protein	-
ACMZ68_RS08025 (ACMZ68_08025)	xcpV	1682734..1683114 (+)	381	WP_069123122.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACMZ68_RS08030 (ACMZ68_08030)	xcpW	1683114..1683815 (+)	702	WP_415872067.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACMZ68_RS08035 (ACMZ68_08035)	gspK	1683816..1684775 (+)	960	WP_039761082.1	type II secretion system minor pseudopilin GspK	-
ACMZ68_RS08040 (ACMZ68_08040)	-	1685004..1685600 (+)	597	WP_415872068.1	6-pyruvoyl trahydropterin synthase family protein	-
ACMZ68_RS08045 (ACMZ68_08045)	ung	1685654..1686367 (+)	714	WP_005069527.1	uracil-DNA glycosylase	-
ACMZ68_RS08050 (ACMZ68_08050)	hibch	1686364..1687488 (+)	1125	WP_415872069.1	enoyl-CoA hydratase/isomerase family protein	-
ACMZ68_RS08055 (ACMZ68_08055)	tadA	1687494..1687997 (+)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
ACMZ68_RS08060 (ACMZ68_08060)	-	1688068..1688508 (+)	441	WP_014206600.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26671.66 Da
• Isoelectric Point: 9.8818

>NTDB_id=1096188 ACMZ68_RS08030 WP_415872067.1 1683114..1683815(+) (xcpW) [Acinetobacter pittii strain AP5091]
MIKNKCFRYPSTASRLAARSSSARLTRASGFTLVELLVSIAIFAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQ
VLRDTLQIIPLSANQSGQLRPALEIDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLS
STLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKGIKMQLTVAGVSYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 702 bp

>NTDB_id=1096188 ACMZ68_RS08030 WP_415872067.1 1683114..1683815(+) (xcpW) [Acinetobacter pittii strain AP5091]
ATGATAAAGAATAAATGTTTTCGCTATCCAAGCACCGCTTCACGTCTTGCGGCACGATCGAGCAGTGCTCGATTAACTCG
TGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATTTTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTT
TTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCTTATCAACAA
GTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAAGCGGGCAATTACGTCCAGCTTTAGAGATTGATAA
TCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAGCAAGGATTATCACCTTTTGAGCGTATCGAATATC
GATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAACTTAAATACTTCAAATAGAGAGCAACCCTTATCA
AGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGACACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAA
TATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGAATAAAAATGCAACTCACGGTTGCAGGTGTAAGTT
ATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAAACAGGGAGGTCAATAA

Domains

Predicted by InterProScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	87.931	99.571	0.876