Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   ACMZ68_RS00815 Genome accession   NZ_CP180522
Coordinates   173483..174637 (-) Length   384 a.a.
NCBI ID   WP_415871603.1    Uniprot ID   -
Organism   Acinetobacter pittii strain AP5091     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 168483..179637
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMZ68_RS00795 (ACMZ68_00795) - 169638..170291 (+) 654 WP_079380979.1 TetR/AcrR family transcriptional regulator -
  ACMZ68_RS00800 (ACMZ68_00800) - 170395..171315 (+) 921 WP_081038521.1 DMT family transporter -
  ACMZ68_RS00805 (ACMZ68_00805) yrdC 171708..172277 (-) 570 WP_005072030.1 L-threonylcarbamoyladenylate synthase -
  ACMZ68_RS00810 (ACMZ68_00810) dprA 172329..173462 (-) 1134 WP_415871602.1 DNA-processing protein DprA Machinery gene
  ACMZ68_RS00815 (ACMZ68_00815) tsaP 173483..174637 (-) 1155 WP_415871603.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  ACMZ68_RS00820 (ACMZ68_00820) def 174760..175290 (+) 531 WP_002114101.1 peptide deformylase -
  ACMZ68_RS00825 (ACMZ68_00825) - 175334..175759 (+) 426 WP_002114087.1 DUF2946 family protein -
  ACMZ68_RS00830 (ACMZ68_00830) oprC 175832..177931 (+) 2100 WP_271649580.1 TonB-dependent copper receptor -
  ACMZ68_RS00835 (ACMZ68_00835) - 177985..178191 (+) 207 WP_086398779.1 hypothetical protein -
  ACMZ68_RS00840 (ACMZ68_00840) - 178259..179473 (-) 1215 WP_415871604.1 oxygenase MpaB family protein -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42657.58 Da        Isoelectric Point: 7.2977

>NTDB_id=1096166 ACMZ68_RS00815 WP_415871603.1 173483..174637(-) (tsaP) [Acinetobacter pittii strain AP5091]
MKKVFDGMVQFHALGIKKHLLALALFTGVAFSTVVETYAASPNHNPPSLKSNAPHVYVVKRGDTLWDISGHFLSKPWRWP
EIWANNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQMTNLQPQVRVESLNNNVPVIPLEHIKQWLE
HSTILPIDAIQHIPYVVGTADQRVLAAKGQTIYARGQGLIDGQRYAVYREGEPYYFTDNKGKKHSLGIELQQVASGIAIS
SEKDITTLELTDSYNSEVRRGDRVMPEEEATLPTLFYPVDATQVTDGGKIIRVMGSIGTAAKNSVVTLDRGTAQGIQVGQ
VFDITQQGETIRDPKTKESIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPVKVGSSIQPPRFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=1096166 ACMZ68_RS00815 WP_415871603.1 173483..174637(-) (tsaP) [Acinetobacter pittii strain AP5091]
ATGAAAAAGGTTTTTGACGGCATGGTTCAATTTCATGCTTTGGGGATAAAAAAGCATTTACTTGCTTTGGCACTTTTTAC
AGGGGTTGCATTCAGTACGGTAGTAGAGACTTATGCTGCTAGTCCGAACCATAATCCACCCTCCCTTAAAAGTAATGCAC
CACATGTCTACGTAGTGAAACGAGGAGATACGCTATGGGATATTTCCGGTCACTTTCTGAGTAAACCTTGGCGCTGGCCT
GAAATTTGGGCAAATAATCAGCATGTCAAAAATCCACACTGGATTTATCCAGGTGATCGATTACTGCTGTGTAGTTTAGA
TGGCCGTCCATTGGTTGGAAAAGATGAGGGAGATGGCTGTGTCGGCATTATTCGCCGCTACACAGGTCAAATGACAAATT
TGCAACCTCAAGTTCGTGTGGAGTCACTTAACAATAACGTACCTGTTATTCCTCTTGAACATATCAAACAATGGTTAGAA
CACAGCACTATTCTACCTATCGATGCAATTCAACATATTCCATATGTAGTCGGTACTGCCGATCAACGTGTACTGGCGGC
AAAAGGTCAGACTATTTATGCGCGCGGACAAGGTTTAATTGATGGTCAACGTTATGCAGTTTATCGTGAAGGTGAACCTT
ATTATTTCACCGATAATAAAGGCAAAAAGCACAGTCTAGGTATTGAGCTACAACAAGTTGCCTCAGGGATTGCGATCTCT
TCTGAAAAAGACATTACCACGCTTGAGTTAACTGATAGCTACAATTCTGAAGTACGTCGTGGTGATCGGGTAATGCCAGA
AGAAGAAGCAACATTGCCTACTTTGTTTTATCCGGTAGATGCCACTCAGGTGACGGACGGCGGCAAAATTATTCGTGTAA
TGGGATCAATTGGTACTGCTGCCAAAAATAGTGTGGTGACTTTAGACCGCGGTACGGCACAAGGTATTCAAGTAGGACAA
GTTTTTGATATTACACAACAAGGTGAAACCATTCGAGATCCTAAAACCAAAGAATCAATACAGTTACCAGGACAACAAAT
TGGTAGTCTGATGGTCTTTAGAACTTTTGATCAGTTGAGTTATGCCTACGTATTAGAAAGCGATTTACCAGTTAAAGTTG
GTTCAAGCATTCAGCCACCCCGCTTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

89.844

100

0.898


Multiple sequence alignment