Detailed information NTG1096089

Bioinformatically predicted

Overview

• Name: pilS
• Type: Regulator
• Locus tag: ACMXYI_RS02575
• Genome accession: NZ_CP180481
• Coordinates: 533081..534670 (+)
• Length: 529 a.a.
• NCBI ID: WP_415771491.1
• Uniprot ID: -
• Organism: Pseudomonas sp. LB3P38
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 528081..539670

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMXYI_RS02555	pgeF	529877..530602 (-)	726	WP_415771488.1	peptidoglycan editing factor PgeF	-
ACMXYI_RS02560	rluD	530599..531561 (-)	963	WP_415771489.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
ACMXYI_RS02565	-	531713..532735 (+)	1023	WP_415771490.1	outer membrane protein assembly factor BamD	-
ACMXYI_RS02570	-	532858..533091 (+)	234	WP_008154904.1	PP0621 family protein	-
ACMXYI_RS02575	pilS	533081..534670 (+)	1590	WP_415771491.1	sensor histidine kinase	Regulator
ACMXYI_RS02580	pilR	534673..536013 (+)	1341	WP_415771493.1	sigma-54-dependent transcriptional regulator	Regulator
ACMXYI_RS02585	thiO	536017..537117 (-)	1101	WP_415771495.1	glycine oxidase ThiO	-
ACMXYI_RS02590	-	537174..537575 (-)	402	WP_415771497.1	type IV pilin protein	-

Sequence

Protein

• Length: 529 a.a.
• Molecular weight: 58523.36 Da
• Isoelectric Point: 6.9387

>NTDB_id=1096089 ACMXYI_RS02575 WP_415771491.1 533081..534670(+) (pilS) [Pseudomonas sp. LB3P38]
MIAETSSPGSKQAQRLLRLYHLYRLSIGITLVLLISSDMDNQLLTSANDDLLRSGSWFYLVLNILLVVFLGNTRRPAQLF
SLALTDVLLLCGLFYAAGGVASAIGNLLIVSIAISNTLLRGRIGLLIAAVGALGIVGLSFLLSFSHPATPNDYLQVGTLG
ALCFAAALLVQGLIRRLEVSETLAEQRASEVVGLEALNALILQRMRTGILVLDDKRRVQLANHSALNLLGRENLAGQLID
DYLPSLVERLQLWLNNPTLRPQSLKVTSSGLELQPSFIALNQSPHHQTLVFLEDLAQIAQQAQQLKLAALGRLTAGIAHE
IRNPLGAVSHAAQLLQESEELNRADRRLTQIIQDHSQRMNRVIENVLQLSRRQQTVAQRLDLKPWLEQFVNETREGATEH
QQIHLRIGSGDFKTLMDPDQLTQILDNLLRNAWRHSALNHDLAQAWLELFVDPDSQLPVLDILDDGPGVAPEHHVHLFEP
FFTTSPQGTGLGLYLSRELCESNQARLDFKPRQGGGCFRITFAHGRKQS

Nucleotide

• Length: 1590 bp

>NTDB_id=1096089 ACMXYI_RS02575 WP_415771491.1 533081..534670(+) (pilS) [Pseudomonas sp. LB3P38]
GTGATCGCTGAGACCTCCAGTCCCGGCAGCAAACAGGCCCAGCGACTGCTGCGCCTCTATCACCTTTACCGTTTGAGCAT
CGGCATCACCTTGGTGCTGTTGATCTCCAGCGACATGGACAACCAGCTGCTGACGTCCGCCAATGACGACCTGCTGCGCA
GTGGCAGCTGGTTTTACCTGGTGCTGAATATCCTGCTGGTGGTATTCCTCGGGAACACCCGGCGCCCGGCGCAACTGTTC
AGCCTGGCGCTGACCGACGTCCTGCTGCTGTGCGGTCTGTTCTACGCCGCCGGCGGTGTGGCCAGTGCCATCGGCAACCT
GCTGATCGTATCGATAGCCATCAGTAACACCTTGTTGCGAGGGCGCATCGGCCTGCTGATTGCCGCCGTTGGCGCGCTTG
GCATCGTCGGGCTGAGCTTCCTCCTGAGCTTCAGCCATCCCGCCACCCCCAACGATTACCTGCAAGTAGGTACGCTCGGC
GCCCTGTGTTTTGCTGCCGCATTGCTGGTGCAAGGGCTGATCCGACGCCTGGAGGTCAGCGAAACCCTCGCAGAACAACG
GGCCAGCGAAGTCGTCGGCCTTGAAGCCCTCAACGCACTGATCCTGCAACGCATGCGTACCGGCATCCTGGTACTCGACG
ACAAACGGCGGGTTCAACTGGCCAACCACAGCGCCTTGAACCTGTTAGGCAGGGAAAATCTTGCAGGCCAGCTGATCGAC
GACTACTTACCCAGCCTGGTCGAACGCCTGCAATTGTGGCTCAACAATCCGACACTGCGCCCCCAGAGCCTGAAAGTCAC
CAGTAGTGGTCTGGAGCTGCAACCGAGCTTCATTGCCCTGAACCAAAGCCCCCACCACCAGACCCTGGTCTTTCTCGAAG
ACCTCGCGCAAATCGCTCAACAAGCCCAGCAATTGAAGCTCGCCGCCCTCGGTCGCCTGACCGCCGGTATCGCCCATGAA
ATCCGCAATCCACTGGGCGCCGTTAGTCATGCCGCGCAGCTATTGCAGGAATCAGAGGAACTGAATCGCGCGGATCGACG
TCTGACACAGATTATTCAAGACCACTCTCAGCGAATGAATCGGGTAATCGAAAACGTCCTGCAACTGTCCCGCCGCCAGC
AAACCGTAGCGCAACGGCTTGATCTGAAGCCGTGGCTGGAACAGTTCGTCAACGAAACCCGCGAGGGGGCGACCGAGCAT
CAGCAGATTCATCTGCGCATCGGCTCAGGAGACTTCAAAACCCTGATGGATCCAGACCAACTGACCCAGATTCTCGACAA
TCTGTTGCGTAACGCCTGGCGCCATAGCGCCTTGAATCACGACCTGGCACAGGCCTGGCTCGAGTTGTTCGTCGACCCGG
ACAGCCAGCTGCCGGTCCTCGATATCCTCGACGATGGCCCCGGCGTGGCACCGGAGCATCACGTGCACTTGTTCGAACCG
TTCTTCACTACCAGCCCCCAAGGCACCGGCCTTGGGCTTTATCTGTCCCGTGAGCTGTGCGAAAGCAACCAGGCCCGCCT
AGACTTCAAGCCACGCCAAGGCGGCGGCTGCTTTCGCATCACCTTTGCTCACGGACGGAAACAAAGTTGA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (417-522)

• His Kinase A (phospho-acceptor) domain (HisKA) (309-374)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilS	Pseudomonas aeruginosa PAK	60.377	100	0.605