Detailed information NTG1096065

Bioinformatically predicted

Overview

• Name: pilS
• Type: Regulator
• Locus tag: ACMXYJ_RS05835
• Genome accession: NZ_CP180480
• Coordinates: 1276613..1278202 (-)
• Length: 529 a.a.
• NCBI ID: WP_415759085.1
• Uniprot ID: -
• Organism: Pseudomonas sp. LT1P18
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1271613..1283202

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMXYJ_RS05820	-	1273714..1274109 (+)	396	WP_415759082.1	type IV pilin protein	-
ACMXYJ_RS05825	thiO	1274166..1275266 (+)	1101	WP_415759083.1	glycine oxidase ThiO	-
ACMXYJ_RS05830	pilR	1275270..1276610 (-)	1341	WP_415759084.1	sigma-54-dependent transcriptional regulator	Regulator
ACMXYJ_RS05835	pilS	1276613..1278202 (-)	1590	WP_415759085.1	sensor histidine kinase	Regulator
ACMXYJ_RS05840	-	1278192..1278425 (-)	234	WP_008154904.1	PP0621 family protein	-
ACMXYJ_RS05845	-	1278548..1279570 (-)	1023	WP_150658187.1	outer membrane protein assembly factor BamD	-
ACMXYJ_RS05850	rluD	1279722..1280684 (+)	963	WP_046048807.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
ACMXYJ_RS05855	pgeF	1280681..1281406 (+)	726	WP_415759086.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 529 a.a.
• Molecular weight: 58639.39 Da
• Isoelectric Point: 6.7096

>NTDB_id=1096065 ACMXYJ_RS05835 WP_415759085.1 1276613..1278202(-) (pilS) [Pseudomonas sp. LT1P18]
MIAETSSPGSKQARRLLRLYHLYRLSIGITLVLLISSNMDNQLLTFSNDDLLRSGSWFYLVLNILLVVFLGNTRRPAQLF
SLALTDVLLLCGLFYAAGGVASAIGNLLIVSVAISNTLLRGRIGLLIAAVGALGIVGLSFLLSFSHPATPNDYLQVGTLG
ALCFAAALLVQGLSRRLEVSETLAEQRASEVVGLEALNALILQRMRTGILVLDDKRRVQLANHSALNLLGRENLSGELID
DYLPSLVERLQLWLNNPTLRPQSLKVASSSLELQPSFIALDQSPHHQTLVFLEDLAQIAQQAQQLKLAALGHLTAGIAHE
IRNPLGAVSHAAQLLQESEELNRADRRLTQIIQDHSQRMNRVIENVLQLSRRQQTVAQRLDLKPWLEQFVNETREGATEH
QQIHLRIGSGDFKTLMDPDQLTQILDNLLRNAWRHSALNHDLAQVWLELFVDPDSQLPVLEILDDGPGVAPEHYVHLFEP
FFTTSPQGTGLGLYLSRELCESNQARLDFNPRQGGGCFRITFAHGRKQS

Nucleotide

• Length: 1590 bp

>NTDB_id=1096065 ACMXYJ_RS05835 WP_415759085.1 1276613..1278202(-) (pilS) [Pseudomonas sp. LT1P18]
GTGATCGCTGAGACCTCCAGTCCCGGCAGCAAACAGGCCCGGCGACTGCTGCGCCTCTATCACCTTTACCGTTTGAGCAT
CGGCATCACCCTGGTGCTGTTGATCTCCAGCAACATGGACAACCAGCTGCTGACGTTCAGCAATGATGACCTGCTGCGCA
GTGGCAGCTGGTTTTACCTGGTGCTGAATATCCTGCTGGTGGTATTCCTCGGGAACACCCGGCGCCCGGCGCAACTGTTC
AGCCTGGCGCTGACCGACGTCCTGCTTCTGTGCGGTCTGTTCTACGCCGCCGGCGGTGTGGCCAGCGCCATCGGCAACTT
GCTGATCGTATCGGTGGCCATCAGTAACACCTTGTTGCGAGGGCGCATCGGCCTGCTGATTGCCGCCGTTGGCGCACTTG
GCATCGTCGGGCTGAGCTTCCTCCTGAGTTTCAGCCATCCCGCCACCCCCAACGATTACCTGCAAGTCGGCACGCTCGGT
GCCTTGTGTTTTGCTGCGGCATTGCTGGTGCAAGGGCTGAGCCGACGCCTGGAGGTCAGCGAAACCCTCGCCGAACAACG
GGCCAGCGAAGTCGTCGGCCTCGAAGCCCTCAACGCACTGATCCTGCAACGCATGCGTACCGGCATCCTGGTACTCGACG
ACAAGCGGCGGGTTCAACTGGCCAACCACAGCGCCTTGAACCTGTTAGGCAGGGAAAATCTTTCAGGCGAGCTGATCGAC
GACTACCTACCCAGCCTGGTCGAACGCCTGCAACTGTGGCTCAACAATCCGACGCTGCGCCCCCAGAGCCTGAAAGTCGC
CAGTAGCAGTCTGGAGCTGCAACCGAGCTTCATTGCCCTGGACCAAAGCCCACACCACCAGACCCTGGTCTTTCTCGAAG
ACCTCGCGCAAATCGCTCAACAAGCCCAGCAATTGAAGCTCGCCGCCCTCGGTCACCTGACCGCCGGTATCGCCCATGAA
ATCCGCAATCCACTGGGCGCCGTTAGTCATGCCGCGCAGCTATTGCAGGAATCGGAGGAACTGAACCGCGCGGATCGACG
TCTGACACAGATTATTCAAGACCACTCTCAGCGAATGAATCGGGTAATCGAAAACGTCCTGCAACTGTCCCGTCGCCAGC
AAACCGTGGCGCAACGGCTTGATCTGAAGCCGTGGCTGGAACAGTTCGTCAACGAAACCCGCGAGGGGGCGACCGAACAT
CAGCAAATTCATCTGCGCATCGGCTCAGGAGACTTCAAAACCCTGATGGATCCAGACCAACTGACTCAGATTCTCGACAA
TCTGTTGCGCAACGCCTGGCGCCATAGCGCCTTGAATCACGACCTGGCGCAGGTCTGGCTTGAGTTGTTCGTCGACCCGG
ACAGCCAGCTGCCGGTCCTCGAAATCCTGGACGACGGCCCCGGCGTGGCACCGGAGCATTATGTGCACTTGTTCGAACCG
TTCTTCACCACGAGCCCCCAAGGCACCGGTCTGGGGCTTTATCTGTCCCGTGAGCTGTGCGAAAGCAACCAGGCCCGCCT
AGACTTCAATCCACGCCAAGGCGGCGGCTGCTTTCGCATCACCTTTGCTCACGGACGGAAACAAAGTTGA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (310-374)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (417-522)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilS	Pseudomonas aeruginosa PAK	60.189	100	0.603