Detailed information NTG1096046

Bioinformatically predicted

Overview

• Name: pilS
• Type: Regulator
• Locus tag: ACMXYH_RS28015
• Genome accession: NZ_CP180479
• Coordinates: 6069044..6070630 (+)
• Length: 528 a.a.
• NCBI ID: WP_415765585.1
• Uniprot ID: -
• Organism: Pseudomonas sp. ZB1P45
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 6064044..6075630

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMXYH_RS27995	pgeF	6065840..6066565 (-)	726	WP_415765583.1	peptidoglycan editing factor PgeF	-
ACMXYH_RS28000	rluD	6066562..6067524 (-)	963	WP_046048807.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
ACMXYH_RS28005	-	6067676..6068698 (+)	1023	WP_415765584.1	outer membrane protein assembly factor BamD	-
ACMXYH_RS28010	-	6068821..6069054 (+)	234	WP_008037883.1	PP0621 family protein	-
ACMXYH_RS28015	pilS	6069044..6070630 (+)	1587	WP_415765585.1	sensor histidine kinase	Regulator
ACMXYH_RS28020	pilR	6070633..6071973 (+)	1341	WP_415765586.1	sigma-54-dependent transcriptional regulator	Regulator
ACMXYH_RS28025	thiO	6072118..6073218 (-)	1101	WP_415765588.1	glycine oxidase ThiO	-
ACMXYH_RS28030	-	6073275..6073676 (-)	402	WP_415765590.1	type IV pilin protein	-

Sequence

Protein

• Length: 528 a.a.
• Molecular weight: 58562.44 Da
• Isoelectric Point: 6.9387

>NTDB_id=1096046 ACMXYH_RS28015 WP_415765585.1 6069044..6070630(+) (pilS) [Pseudomonas sp. ZB1P45]
MIAETSSPGSKQAQRLLRLYHLYRLSIGITLVLLISSNMDNQLLTFSNDDLLRSGSWFYLVLNILLVVFLGNTRRPAQLF
SLALTDVLLLCGLFYAGGGVASAIGNLLIVSVAISNTLLRGRIGLLIAAVGALGIVGLSFLLSFSHPATPNDYLQVSTLG
ALCFAAALLVQGLIRRLEVSETLAEQRASEVVGLEALNALILQRMRTGILVLDDKRRVQLANHSALNLLGRENLAGQLID
DYLPSLVERLQLWLNNPTLRPQSLKVASSGLELQPSFIALDQSPHHQTLVFLEDLAQIAQQAQQLKLAALGRLTAGIAHE
IRNPLGAVSHAAQLLQESEELNRADRRLTQIIQDHSQRMNRVIENVLQLSRRQQTVAQRLDLKPWLEQYVNETREGAAEH
QQIHLRIGSGDFKTLMDPDQLTQILDNLLRNAWRHSALNHDLAQVWLELFVDLDSQLPVLEILDDGPGVAPEHHVHLFEP
FFTTSPQGTGLGLYLSRELCESNQARLDFKTRQGGCFRITFAHGRKQS

Nucleotide

• Length: 1587 bp

>NTDB_id=1096046 ACMXYH_RS28015 WP_415765585.1 6069044..6070630(+) (pilS) [Pseudomonas sp. ZB1P45]
GTGATCGCTGAGACCTCCAGTCCCGGCAGCAAACAGGCCCAGCGACTGCTGCGCCTCTATCACCTTTACCGCTTGAGCAT
CGGCATCACCCTGGTGCTGTTGATCTCCAGCAACATGGACAACCAGCTGCTGACGTTCAGCAATGACGACCTGCTGCGCA
GTGGCAGCTGGTTTTACCTGGTGCTGAATATCCTGCTGGTGGTATTCCTCGGGAACACCCGGCGCCCGGCGCAACTGTTC
AGCCTGGCGCTGACCGACGTCCTGCTGCTGTGCGGTCTGTTCTACGCCGGCGGCGGTGTGGCCAGCGCCATCGGCAACTT
GCTGATCGTATCGGTAGCCATCAGTAACACCTTGTTGCGAGGGCGCATCGGCCTGCTGATTGCCGCGGTTGGCGCGCTCG
GCATCGTCGGGCTGAGCTTCCTCCTGAGTTTCAGCCATCCCGCCACCCCCAACGATTACCTGCAAGTCAGCACGCTCGGC
GCCTTGTGTTTTGCTGCGGCATTGCTGGTGCAAGGGCTGATCCGACGCCTGGAAGTCAGCGAAACCCTCGCCGAACAACG
GGCCAGCGAAGTCGTCGGCCTCGAAGCCCTCAACGCACTGATCCTGCAACGCATGCGTACCGGCATCCTGGTACTCGACG
ACAAGCGGCGGGTTCAACTGGCCAACCACAGCGCCTTGAACCTGTTAGGCAGGGAAAATCTTGCAGGCCAACTGATCGAC
GACTACTTACCCAGCCTGGTCGAACGCCTGCAACTGTGGCTCAACAATCCGACGCTGCGCCCCCAGAGCCTGAAAGTCGC
CAGTAGTGGTCTGGAGCTGCAACCGAGCTTCATTGCCCTGGACCAAAGTCCACACCACCAGACCCTGGTCTTTCTCGAAG
ACCTCGCGCAAATCGCCCAACAGGCCCAACAACTGAAGCTCGCTGCCCTCGGTCGCCTGACCGCCGGTATCGCCCATGAA
ATCCGCAATCCACTGGGCGCCGTTAGTCATGCCGCGCAGCTATTGCAAGAATCAGAGGAACTGAACCGCGCGGATCGACG
TCTGACACAGATTATTCAAGACCACTCTCAGCGAATGAATCGGGTAATCGAAAACGTCCTGCAACTGTCCCGCCGCCAGC
AAACCGTAGCGCAACGGCTTGATCTGAAGCCGTGGCTGGAGCAATACGTCAACGAAACCCGCGAGGGGGCGGCCGAGCAT
CAGCAGATTCATCTGCGCATCGGCTCAGGAGACTTCAAAACCCTGATGGACCCAGACCAACTGACCCAGATTCTCGACAA
TCTGTTGCGTAACGCCTGGCGCCATAGCGCCTTGAATCACGACCTGGCACAGGTCTGGCTCGAGTTGTTTGTTGACCTGG
ACAGCCAGCTGCCGGTCCTCGAGATCCTGGACGATGGCCCCGGCGTGGCACCGGAGCATCACGTGCACTTGTTCGAACCG
TTCTTCACCACCAGCCCCCAAGGCACCGGCCTGGGGCTTTATCTGTCCCGTGAGCTGTGCGAAAGCAACCAGGCCCGCCT
AGACTTCAAAACACGCCAAGGCGGCTGCTTTCGCATCACTTTTGCTCACGGACGGAAACAAAGTTGA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (417-521)

• His Kinase A (phospho-acceptor) domain (HisKA) (309-374)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilS	Pseudomonas aeruginosa PAK	60.189	100	0.604