Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ACMX8W_RS17275 Genome accession   NZ_CP180439
Coordinates   3271557..3273857 (-) Length   766 a.a.
NCBI ID   WP_415749590.1    Uniprot ID   -
Organism   Bacillus subtilis strain Z-294     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3266557..3278857
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMX8W_RS17235 (ACMX8W_17235) mrpB 3267025..3267456 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  ACMX8W_RS17240 (ACMX8W_17240) mrpC 3267456..3267797 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  ACMX8W_RS17245 (ACMX8W_17245) mrpD 3267790..3269271 (+) 1482 WP_174616586.1 Na+/H+ antiporter subunit D -
  ACMX8W_RS17250 (ACMX8W_17250) mrpE 3269277..3269753 (+) 477 WP_174616587.1 Na+/H+ antiporter subunit E -
  ACMX8W_RS17255 (ACMX8W_17255) mrpF 3269753..3270037 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  ACMX8W_RS17260 (ACMX8W_17260) mnhG 3270021..3270395 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  ACMX8W_RS17265 (ACMX8W_17265) yuxO 3270434..3270814 (-) 381 WP_174616601.1 hotdog fold thioesterase -
  ACMX8W_RS17270 (ACMX8W_17270) comA 3270832..3271476 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ACMX8W_RS17275 (ACMX8W_17275) comP 3271557..3273857 (-) 2301 WP_415749590.1 histidine kinase Regulator
  ACMX8W_RS17280 (ACMX8W_17280) comX 3273869..3274033 (-) 165 WP_015384519.1 competence pheromone ComX -
  ACMX8W_RS17285 (ACMX8W_17285) - 3274046..3274906 (-) 861 WP_015483633.1 polyprenyl synthetase family protein -
  ACMX8W_RS17290 (ACMX8W_17290) degQ 3275091..3275231 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ACMX8W_RS17295 (ACMX8W_17295) - 3275453..3275578 (+) 126 WP_154796978.1 hypothetical protein -
  ACMX8W_RS17300 (ACMX8W_17300) - 3275692..3276060 (+) 369 WP_015483634.1 hypothetical protein -
  ACMX8W_RS17305 (ACMX8W_17305) pdeH 3276036..3277265 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88612.81 Da        Isoelectric Point: 8.0572

>NTDB_id=1095901 ACMX8W_RS17275 WP_415749590.1 3271557..3273857(-) (comP) [Bacillus subtilis strain Z-294]
MKAWYNKVSIFLILVSLVYVTYLTYISSSKLLVGAAVAENQDNEVVITNIEEFSTAYYSGIQKGDVIKSINNHKVKRPLE
VQKYNSNHVSSIVVERDGEKVKIKPDLMNDGNFTTFVIPLIFYIACLFCCFFILKINESKKLLSALILIIFLLSASLAYL
SAGGSAKGDWLSRCIMVFTLTSVMFNYLLFLYQYFKELGTVLFNKKVFILYAIPVLNLVFELLRTQLFFRHYVPKINLLS
FFISFIIVSVYFGSILIKSKDTEQAHIIKVLTIINILSFSPFLFLYIIPYVFLSTDGISSFVAASFMFLIPFSLVYQFMT
NKIYNVDFILSRLKYYGILALTPTIILVTVFELIGNPAGDFYYFRLAILMYIIMVAVFYYKEVLDFKFRLKRVSEKFNYQ
DSIYKFTQLIRDSTSLIQVFEELKTTILEVSLVSRAHIYEVSVDGSIKLYEELNQNSFEKVYQKEFRKVTSEIGKIVEFN
KGFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTI
EEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGL
VKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGF
DQDKNTEHSMSMRLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=1095901 ACMX8W_RS17275 WP_415749590.1 3271557..3273857(-) (comP) [Bacillus subtilis strain Z-294]
ATGAAGGCATGGTACAACAAAGTTTCAATTTTTTTGATTTTAGTTAGTTTAGTCTATGTAACTTATTTAACATATATAAG
TTCGAGTAAACTTTTAGTTGGTGCAGCAGTAGCCGAAAATCAAGACAATGAAGTTGTAATAACAAATATTGAGGAATTTT
CTACGGCTTATTACTCAGGCATACAAAAAGGGGACGTCATCAAAAGTATTAATAATCATAAAGTTAAGCGTCCTCTTGAA
GTTCAAAAATATAATTCAAACCATGTGAGTTCAATAGTCGTCGAGAGAGATGGAGAAAAGGTTAAAATTAAGCCTGATTT
AATGAATGATGGGAATTTTACTACTTTTGTGATCCCATTAATATTTTATATAGCCTGTCTATTTTGTTGTTTCTTCATTC
TAAAAATAAATGAATCGAAAAAACTACTCTCTGCTTTGATTTTAATCATTTTCTTGTTATCTGCTTCTTTAGCATACTTA
AGTGCGGGTGGATCTGCAAAGGGAGATTGGTTAAGCAGATGTATAATGGTATTCACTTTAACATCTGTAATGTTTAACTA
TCTTCTTTTCTTGTATCAGTATTTTAAAGAACTTGGCACTGTGTTATTTAACAAAAAAGTTTTTATATTATATGCAATTC
CAGTACTAAATCTAGTTTTTGAATTGTTGCGAACTCAACTTTTCTTTAGACATTATGTGCCTAAAATAAATTTACTTTCG
TTCTTTATTTCATTTATAATCGTGAGCGTATATTTTGGATCTATTTTAATTAAAAGTAAGGATACTGAACAAGCACATAT
TATAAAAGTTCTTACCATAATTAATATCTTATCTTTTTCGCCGTTTTTGTTTTTATATATAATACCTTATGTATTCTTAA
GCACTGATGGGATTTCTTCTTTTGTAGCTGCTTCATTTATGTTCCTAATACCATTCTCTTTGGTTTATCAATTTATGACA
AATAAAATTTATAATGTGGATTTTATTTTGAGCAGGTTAAAATATTATGGAATATTAGCATTAACGCCCACAATTATTTT
AGTTACGGTATTCGAGTTAATAGGAAATCCAGCTGGAGATTTCTATTATTTCAGACTGGCGATTCTTATGTATATTATTA
TGGTGGCGGTCTTTTATTATAAGGAAGTACTTGATTTCAAATTTAGATTAAAAAGAGTTTCGGAAAAATTTAATTATCAA
GACAGTATATATAAATTTACGCAGCTGATTAGAGATTCAACTTCTTTGATCCAAGTATTTGAGGAACTGAAAACTACAAT
ACTTGAGGTTTCGCTTGTAAGCCGAGCCCATATTTATGAGGTTTCAGTTGATGGAAGTATTAAACTCTATGAAGAACTTA
ATCAAAATTCATTTGAAAAAGTCTATCAAAAAGAATTTAGAAAAGTAACATCCGAAATAGGGAAAATCGTTGAATTTAAT
AAAGGTTTTGTCATGAAAATAGGTGAACGCGGTGGTAAATCATTTGTGATCCTTTGTTTATCTAAAATGAATACGCCTCG
TCTCACACTCGAAGAACTTTCTTGGCTGAAAACTTTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATTG
AAGAACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTCATGTATACGATC
GAGGAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAAACGCCAGTG
TGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTACAGATGAATG
AGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGATTG
GTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACTGGGAGATTTAC
GGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTTAAGCACTCTC
AGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGATGGCGTAGGGTTT
GATCAAGATAAAAATACTGAGCATTCTATGAGCATGAGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCG
CCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA

Domains


Predicted by InterproScan.

(33-76)

(565-635)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

57.653

100

0.59


Multiple sequence alignment