Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | ACMX8W_RS13450 | Genome accession | NZ_CP180439 |
| Coordinates | 2571844..2572179 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain Z-294 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2566844..2577179
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMX8W_RS13430 (ACMX8W_13430) | gcvT | 2567436..2568524 (-) | 1089 | WP_015384081.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ACMX8W_RS13435 (ACMX8W_13435) | hepAA | 2568966..2570639 (+) | 1674 | WP_047182869.1 | DEAD/DEAH box helicase | - |
| ACMX8W_RS13440 (ACMX8W_13440) | yqhG | 2570660..2571454 (+) | 795 | WP_003230200.1 | YqhG family protein | - |
| ACMX8W_RS13445 (ACMX8W_13445) | sinI | 2571637..2571810 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| ACMX8W_RS13450 (ACMX8W_13450) | sinR | 2571844..2572179 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| ACMX8W_RS13455 (ACMX8W_13455) | tasA | 2572272..2573057 (-) | 786 | WP_003230183.1 | biofilm matrix protein TasA | - |
| ACMX8W_RS13460 (ACMX8W_13460) | sipW | 2573121..2573693 (-) | 573 | WP_080030740.1 | signal peptidase I SipW | - |
| ACMX8W_RS13465 (ACMX8W_13465) | tapA | 2573677..2574438 (-) | 762 | WP_047182870.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ACMX8W_RS13470 (ACMX8W_13470) | yqzG | 2574708..2575034 (+) | 327 | WP_047183570.1 | YqzG/YhdC family protein | - |
| ACMX8W_RS13475 (ACMX8W_13475) | spoIITA | 2575076..2575255 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| ACMX8W_RS13480 (ACMX8W_13480) | comGG | 2575327..2575701 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| ACMX8W_RS13485 (ACMX8W_13485) | comGF | 2575702..2576085 (-) | 384 | WP_015384087.1 | ComG operon protein ComGF | Machinery gene |
| ACMX8W_RS13490 (ACMX8W_13490) | comGE | 2576111..2576458 (-) | 348 | WP_047182872.1 | ComG operon protein 5 | Machinery gene |
| ACMX8W_RS13495 (ACMX8W_13495) | comGD | 2576442..2576873 (-) | 432 | WP_015384089.1 | comG operon protein ComGD | Machinery gene |
| ACMX8W_RS13500 (ACMX8W_13500) | comGC | 2576863..2577159 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=1095879 ACMX8W_RS13450 WP_003226345.1 2571844..2572179(+) (sinR) [Bacillus subtilis strain Z-294]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=1095879 ACMX8W_RS13450 WP_003226345.1 2571844..2572179(+) (sinR) [Bacillus subtilis strain Z-294]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
TCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
TCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |