Detailed information    

insolico Bioinformatically predicted

Overview


Name   degS   Type   Regulator
Locus tag   ACMX77_RS19320 Genome accession   NZ_CP180438
Coordinates   3674083..3675240 (-) Length   385 a.a.
NCBI ID   WP_003227983.1    Uniprot ID   A0A199WDV9
Organism   Bacillus subtilis strain W-2     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 3669083..3680240
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMX77_RS19290 (ACMX77_19290) yvyF 3669336..3669755 (-) 420 WP_003227995.1 TIGR03826 family flagellar region protein -
  ACMX77_RS19295 (ACMX77_19295) comFC 3669829..3670551 (-) 723 WP_047183272.1 comF operon protein ComFC Machinery gene
  ACMX77_RS19300 (ACMX77_19300) comFB 3670515..3670811 (-) 297 WP_015483764.1 late competence protein ComFB -
  ACMX77_RS19305 (ACMX77_19305) comFA 3670871..3672262 (-) 1392 WP_047183273.1 ATP-dependent helicase ComFA Machinery gene
  ACMX77_RS19310 (ACMX77_19310) fakBA 3672368..3673213 (-) 846 WP_047183274.1 DegV family protein -
  ACMX77_RS19315 (ACMX77_19315) degU 3673311..3674000 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  ACMX77_RS19320 (ACMX77_19320) degS 3674083..3675240 (-) 1158 WP_003227983.1 two-component sensor histidine kinase DegS Regulator
  ACMX77_RS19325 (ACMX77_19325) yvyE 3675457..3676110 (+) 654 WP_003227979.1 YigZ family protein -
  ACMX77_RS19330 (ACMX77_19330) tagV 3676110..3677285 (+) 1176 WP_047183275.1 polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV -
  ACMX77_RS19335 (ACMX77_19335) tagO 3677358..3678434 (-) 1077 WP_003227975.1 MraY family glycosyltransferase -
  ACMX77_RS19340 (ACMX77_19340) tuaH 3678579..3679772 (-) 1194 WP_080344290.1 teichuronic acid biosynthesis protein TuaH -

Sequence


Protein


Download         Length: 385 a.a.        Molecular weight: 44957.76 Da        Isoelectric Point: 6.2957

>NTDB_id=1095829 ACMX77_RS19320 WP_003227983.1 3674083..3675240(-) (degS) [Bacillus subtilis strain W-2]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=1095829 ACMX77_RS19320 WP_003227983.1 3674083..3675240(-) (degS) [Bacillus subtilis strain W-2]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATTGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAGATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A199WDV9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment