Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACMVYK_RS07170 | Genome accession | NZ_CP180313 |
| Coordinates | 1484175..1484570 (-) | Length | 131 a.a. |
| NCBI ID | WP_002457121.1 | Uniprot ID | A0A7H5C5S7 |
| Organism | Staphylococcus epidermidis strain YSMAS1_1_E3 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1479175..1489570
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMVYK_RS07145 (ACMVYK_07145) | thiE | 1479916..1480554 (-) | 639 | WP_415405365.1 | thiamine phosphate synthase | - |
| ACMVYK_RS07150 (ACMVYK_07150) | thiM | 1480560..1481348 (-) | 789 | WP_001829971.1 | hydroxyethylthiazole kinase | - |
| ACMVYK_RS07155 (ACMVYK_07155) | thiD | 1481341..1482162 (-) | 822 | WP_001832736.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACMVYK_RS07160 (ACMVYK_07160) | tenA | 1482155..1482844 (-) | 690 | WP_001829894.1 | thiaminase II | - |
| ACMVYK_RS07165 (ACMVYK_07165) | - | 1483128..1483787 (-) | 660 | WP_001829904.1 | transglycosylase family protein | - |
| ACMVYK_RS07170 (ACMVYK_07170) | ssb | 1484175..1484570 (-) | 396 | WP_002457121.1 | single-stranded DNA-binding protein | Machinery gene |
| ACMVYK_RS07175 (ACMVYK_07175) | - | 1484761..1485201 (+) | 441 | WP_001829935.1 | YwpF-like family protein | - |
| ACMVYK_RS07180 (ACMVYK_07180) | fabZ | 1485519..1485956 (-) | 438 | WP_001829953.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| ACMVYK_RS07185 (ACMVYK_07185) | murA | 1485990..1487255 (-) | 1266 | WP_001829978.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| ACMVYK_RS07190 (ACMVYK_07190) | - | 1487365..1487598 (-) | 234 | WP_002456242.1 | DUF1146 family protein | - |
| ACMVYK_RS07195 (ACMVYK_07195) | - | 1487747..1488151 (-) | 405 | WP_002447782.1 | F0F1 ATP synthase subunit epsilon | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15159.02 Da Isoelectric Point: 5.2661
>NTDB_id=1095199 ACMVYK_RS07170 WP_002457121.1 1484175..1484570(-) (ssb) [Staphylococcus epidermidis strain YSMAS1_1_E3]
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDNNEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDNNEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
Nucleotide
Download Length: 396 bp
>NTDB_id=1095199 ACMVYK_RS07170 WP_002457121.1 1484175..1484570(-) (ssb) [Staphylococcus epidermidis strain YSMAS1_1_E3]
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATCTATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATAATAATGAAATTTCTACAGATTATTTACTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATAAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATCTATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATAATAATGAAATTTCTACAGATTATTTACTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATAAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
74.046 |
100 |
0.74 |
| ssb | Staphylococcus aureus MW2 |
73.282 |
100 |
0.733 |