Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   ACMVYM_RS08655 Genome accession   NZ_CP180297
Coordinates   1777939..1778835 (-) Length   298 a.a.
NCBI ID   WP_002456718.1    Uniprot ID   A0A2T4LGX3
Organism   Staphylococcus epidermidis strain YSMAS1_1_C10     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1772939..1783835
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMVYM_RS08640 (ACMVYM_08640) - 1774371..1774961 (-) 591 WP_001830621.1 DUF4064 domain-containing protein -
  ACMVYM_RS08645 (ACMVYM_08645) - 1775065..1777077 (-) 2013 WP_002456335.1 ABC transporter permease -
  ACMVYM_RS08650 (ACMVYM_08650) - 1777079..1777828 (-) 750 WP_001830627.1 ABC transporter ATP-binding protein -
  ACMVYM_RS08655 (ACMVYM_08655) braS 1777939..1778835 (-) 897 WP_002456718.1 sensor histidine kinase Regulator
  ACMVYM_RS08660 (ACMVYM_08660) braR 1778841..1779506 (-) 666 WP_001830679.1 response regulator transcription factor Regulator
  ACMVYM_RS08665 (ACMVYM_08665) - 1779537..1779716 (-) 180 WP_001830653.1 hypothetical protein -
  ACMVYM_RS08670 (ACMVYM_08670) - 1780014..1781483 (+) 1470 WP_002437984.1 alkaline phosphatase -
  ACMVYM_RS08675 (ACMVYM_08675) - 1781606..1783150 (-) 1545 WP_001830616.1 NAD(P)H-binding protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34883.51 Da        Isoelectric Point: 6.8361

>NTDB_id=1095164 ACMVYM_RS08655 WP_002456718.1 1777939..1778835(-) (braS) [Staphylococcus epidermidis strain YSMAS1_1_C10]
MKFAYIQSIRNEISIILIILLFFALIFYVFSLPFDAYVLAISIILLLMCVRWWIKYLSFKKNEHLKDKVAYLEHELAHVK
NQQIEYRNDVESYFLTWVHQIKTPITASQLLLERNEENVVNRVRQEIVHIDNYTSLALSYLKLLNEESDMTITKVTVDDL
IRPLILKYRIQFIEQKTQIHYEKSEDIILTDAQWASIMIEQLLNNALKYAKGKDIWIDFDVANQTLQIKDNGIGISKADI
PKIFDKGYSGFNGRLNEQSTGIGLFIVQHIANHLNIQVTVQSELNHGTVFFIHFTKEK

Nucleotide


Download         Length: 897 bp        

>NTDB_id=1095164 ACMVYM_RS08655 WP_002456718.1 1777939..1778835(-) (braS) [Staphylococcus epidermidis strain YSMAS1_1_C10]
ATGAAGTTTGCATATATTCAATCGATTCGTAATGAGATTTCAATTATTTTAATAATTCTATTATTTTTTGCACTTATATT
TTATGTGTTTTCTTTACCTTTTGATGCATACGTACTAGCAATCAGTATAATATTACTATTGATGTGTGTACGTTGGTGGA
TAAAGTATTTAAGTTTTAAAAAGAATGAACATCTTAAAGATAAAGTAGCATATTTAGAACATGAGTTAGCACATGTTAAG
AATCAGCAAATTGAATATCGTAACGATGTTGAAAGTTATTTTTTAACATGGGTACATCAAATTAAAACACCTATCACTGC
CTCACAATTACTTTTGGAGAGAAACGAGGAGAATGTAGTTAATCGTGTTCGACAAGAAATTGTGCACATTGATAATTATA
CAAGTCTCGCATTAAGTTATTTAAAATTATTAAATGAAGAGTCAGATATGACAATTACCAAAGTGACAGTTGATGATTTG
ATTCGCCCGTTGATTTTAAAATATAGAATTCAGTTTATTGAACAAAAGACGCAAATCCATTATGAAAAAAGTGAGGACAT
TATTTTAACCGATGCACAATGGGCTTCTATAATGATAGAGCAACTTTTAAATAATGCTTTAAAATATGCTAAAGGTAAAG
ATATTTGGATAGATTTTGATGTTGCCAATCAAACTCTACAGATTAAAGATAATGGTATTGGGATTAGTAAAGCAGATATT
CCTAAAATTTTTGATAAAGGATACTCAGGATTTAACGGTAGATTGAATGAACAATCAACTGGTATAGGTCTATTTATAGT
GCAACACATTGCAAATCATTTAAATATACAAGTAACTGTACAATCAGAGTTGAATCATGGGACAGTATTTTTTATACATT
TTACTAAAGAAAAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2T4LGX3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

60.339

98.993

0.597

Multiple sequence alignment