Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACMVYM_RS06140 | Genome accession | NZ_CP180297 |
| Coordinates | 1271951..1272346 (-) | Length | 131 a.a. |
| NCBI ID | WP_001829977.1 | Uniprot ID | A0A4Q9W3V8 |
| Organism | Staphylococcus epidermidis strain YSMAS1_1_C10 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1266951..1277346
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMVYM_RS06115 (ACMVYM_06115) | thiE | 1267691..1268329 (-) | 639 | WP_002505076.1 | thiamine phosphate synthase | - |
| ACMVYM_RS06120 (ACMVYM_06120) | thiM | 1268335..1269123 (-) | 789 | WP_001829971.1 | hydroxyethylthiazole kinase | - |
| ACMVYM_RS06125 (ACMVYM_06125) | thiD | 1269116..1269937 (-) | 822 | WP_001832736.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACMVYM_RS06130 (ACMVYM_06130) | tenA | 1269930..1270619 (-) | 690 | WP_001829894.1 | thiaminase II | - |
| ACMVYM_RS06135 (ACMVYM_06135) | - | 1270904..1271563 (-) | 660 | WP_001829904.1 | transglycosylase family protein | - |
| ACMVYM_RS06140 (ACMVYM_06140) | ssb | 1271951..1272346 (-) | 396 | WP_001829977.1 | single-stranded DNA-binding protein | Machinery gene |
| ACMVYM_RS06145 (ACMVYM_06145) | - | 1272537..1272977 (+) | 441 | WP_415434053.1 | YwpF-like family protein | - |
| ACMVYM_RS06150 (ACMVYM_06150) | fabZ | 1273295..1273732 (-) | 438 | WP_001829953.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| ACMVYM_RS06155 (ACMVYM_06155) | murA | 1273766..1275031 (-) | 1266 | WP_002456243.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| ACMVYM_RS06160 (ACMVYM_06160) | - | 1275141..1275374 (-) | 234 | WP_002456242.1 | DUF1146 family protein | - |
| ACMVYM_RS06165 (ACMVYM_06165) | - | 1275523..1275927 (-) | 405 | WP_002447782.1 | F0F1 ATP synthase subunit epsilon | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15158.08 Da Isoelectric Point: 5.2661
>NTDB_id=1095161 ACMVYM_RS06140 WP_001829977.1 1271951..1272346(-) (ssb) [Staphylococcus epidermidis strain YSMAS1_1_C10]
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDINEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDINEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
Nucleotide
Download Length: 396 bp
>NTDB_id=1095161 ACMVYM_RS06140 WP_001829977.1 1271951..1272346(-) (ssb) [Staphylococcus epidermidis strain YSMAS1_1_C10]
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATCTATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATATTAATGAAATTTCTACAGATTATTTACTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATAAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATCTATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATATTAATGAAATTTCTACAGATTATTTACTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATAAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
73.282 |
100 |
0.733 |
| ssb | Staphylococcus aureus MW2 |
72.519 |
100 |
0.725 |