Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   ACMVYO_RS03375 Genome accession   NZ_CP180296
Coordinates   672683..673717 (-) Length   344 a.a.
NCBI ID   WP_017175228.1    Uniprot ID   A0A4V2KX37
Organism   Staphylococcus hominis strain YSMAS1_1_D4     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 667683..678717
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMVYO_RS03340 (ACMVYO_03340) - 667748..668281 (-) 534 WP_017175224.1 acyl-CoA thioesterase -
  ACMVYO_RS03345 (ACMVYO_03345) - 668314..669561 (-) 1248 WP_017175225.1 aminopeptidase -
  ACMVYO_RS03350 (ACMVYO_03350) - 669573..669779 (-) 207 WP_002450082.1 DUF1128 domain-containing protein -
  ACMVYO_RS03355 (ACMVYO_03355) - 669921..670385 (+) 465 WP_017175226.1 low molecular weight protein-tyrosine-phosphatase -
  ACMVYO_RS03360 (ACMVYO_03360) - 670391..670672 (+) 282 WP_049434620.1 hypothetical protein -
  ACMVYO_RS03365 (ACMVYO_03365) - 670764..671972 (+) 1209 WP_049415638.1 YihY/virulence factor BrkB family protein -
  ACMVYO_RS03370 (ACMVYO_03370) vraR 672052..672681 (-) 630 WP_002450048.1 two-component system response regulator VraR Regulator
  ACMVYO_RS03375 (ACMVYO_03375) vraS 672683..673717 (-) 1035 WP_017175228.1 sensor histidine kinase Regulator
  ACMVYO_RS03380 (ACMVYO_03380) liaF 673714..674415 (-) 702 WP_048761633.1 cell wall-active antibiotics response protein LiaF -
  ACMVYO_RS03385 (ACMVYO_03385) - 674436..674822 (-) 387 WP_019835590.1 hypothetical protein -
  ACMVYO_RS03390 (ACMVYO_03390) - 675153..675245 (+) 93 Protein_634 hypothetical protein -
  ACMVYO_RS03395 (ACMVYO_03395) map 675498..676250 (-) 753 WP_049382583.1 type I methionyl aminopeptidase -
  ACMVYO_RS03400 (ACMVYO_03400) - 676424..677413 (+) 990 WP_049434617.1 FUSC family protein -
  ACMVYO_RS03405 (ACMVYO_03405) - 677462..678178 (-) 717 WP_048761639.1 type 1 glutamine amidotransferase -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 39716.26 Da        Isoelectric Point: 5.8932

>NTDB_id=1095119 ACMVYO_RS03375 WP_017175228.1 672683..673717(-) (vraS) [Staphylococcus hominis strain YSMAS1_1_D4]
MNHYLRAIGSMLILVYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLVIILLCIIVGSVLAYKINQQNDWIKN
QIEHAIEGETVGINDKNIELYNETIDIYQMLVPLNQELQRLRIKTQNLTNENYNMNDIKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETELEPPLNQQIPVLEKMIQESQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVIYDI
QDFKVPKGIEDHLFRITQEAISNTLRHSDGTKVTVELFNHQDYLLLRIQDNGKGFNVDEKVEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLTKEEG

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=1095119 ACMVYO_RS03375 WP_017175228.1 672683..673717(-) (vraS) [Staphylococcus hominis strain YSMAS1_1_D4]
ATGAATCACTATTTAAGAGCAATAGGATCCATGCTTATTTTAGTGTATAGCATGCTAACTGCGTTTTTATTTATAGATAA
AGTTTTTGTAAATATTATATATTTTCAAGGAATGTTCTATACTCAAATATTTGGTATACCTGTGTTTCTATTTCTTAATT
TAGTGATTATTTTACTTTGTATTATCGTTGGCTCTGTATTAGCTTATAAAATAAATCAGCAAAATGATTGGATAAAGAAT
CAAATTGAACACGCCATTGAAGGTGAAACGGTAGGTATTAATGATAAAAACATAGAACTATATAATGAAACAATTGATAT
TTATCAAATGTTAGTGCCTTTAAATCAAGAATTACAGCGATTAAGAATCAAAACTCAAAATTTAACAAATGAAAACTACA
ATATGAATGACATTAAAGTAAAAAAAATTATAGAAGATGAGCGTCAGCGTTTAGCAAGGGAATTACACGATTCAGTAAGT
CAACAACTTTTCGCAGCAAGTATGATGTTATCAGCGATAAAAGAAACAGAACTAGAACCACCCCTTAACCAACAAATTCC
AGTACTTGAGAAAATGATACAAGAATCTCAATTAGAGATGCGAGCGCTGTTACTACATTTGCGACCTTTAGGACTCAAGG
ATAAATCATTAGGGGAAGGTATTAAAGATTTAGTCATTGATTTACAAAAGAAAGTACCTATGAAAGTCATTTATGATATA
CAAGATTTTAAAGTGCCTAAAGGAATTGAAGATCATCTATTTCGAATTACACAAGAGGCAATTTCAAATACATTAAGACA
TTCTGATGGAACTAAAGTGACAGTCGAATTATTTAATCATCAAGATTATTTATTATTAAGAATTCAAGATAATGGTAAAG
GCTTTAACGTAGATGAAAAAGTAGAACAAAGTTATGGATTGAAAAATATGAGAGAACGTGCATTAGAAATAGGTGCAACG
TTTCATATCGTATCTCTACCAGATTCAGGAACTAGAATAGAGGTAAAAGCACCTTTAACGAAAGAGGAGGGTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4V2KX37

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

89.826

100

0.898


Multiple sequence alignment