Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | ACMVYP_RS09365 | Genome accession | NZ_CP180295 |
| Coordinates | 1873557..1874531 (-) | Length | 324 a.a. |
| NCBI ID | WP_017176236.1 | Uniprot ID | - |
| Organism | Staphylococcus hominis strain YSMAS1_1_A7 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1868557..1879531
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMVYP_RS09335 (ACMVYP_09335) | gcvT | 1869117..1870208 (-) | 1092 | WP_017176243.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ACMVYP_RS09340 (ACMVYP_09340) | - | 1870403..1870912 (-) | 510 | WP_017176242.1 | shikimate kinase | - |
| ACMVYP_RS09345 (ACMVYP_09345) | - | 1871077..1871574 (-) | 498 | WP_017176240.1 | competence protein ComG | - |
| ACMVYP_RS09350 (ACMVYP_09350) | comGD | 1871766..1872200 (-) | 435 | WP_017176239.1 | competence type IV pilus minor pilin ComGD | - |
| ACMVYP_RS09355 (ACMVYP_09355) | comGC | 1872190..1872501 (-) | 312 | WP_017176238.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACMVYP_RS09360 (ACMVYP_09360) | comGB | 1872521..1873579 (-) | 1059 | WP_048681721.1 | competence type IV pilus assembly protein ComGB | - |
| ACMVYP_RS09365 (ACMVYP_09365) | comGA | 1873557..1874531 (-) | 975 | WP_017176236.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACMVYP_RS09370 (ACMVYP_09370) | - | 1874582..1875208 (-) | 627 | WP_017176235.1 | MBL fold metallo-hydrolase | - |
| ACMVYP_RS09375 (ACMVYP_09375) | - | 1875210..1875533 (-) | 324 | WP_017176234.1 | MTH1187 family thiamine-binding protein | - |
| ACMVYP_RS09380 (ACMVYP_09380) | - | 1875533..1876519 (-) | 987 | WP_002449785.1 | ROK family glucokinase | - |
| ACMVYP_RS09385 (ACMVYP_09385) | - | 1876516..1876719 (-) | 204 | WP_017176233.1 | YqgQ family protein | - |
| ACMVYP_RS09390 (ACMVYP_09390) | - | 1876703..1878160 (-) | 1458 | WP_017176232.1 | rhomboid family protein | - |
| ACMVYP_RS09395 (ACMVYP_09395) | - | 1878160..1878711 (-) | 552 | WP_017176231.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| ACMVYP_RS09400 (ACMVYP_09400) | rpmG | 1878922..1879071 (-) | 150 | WP_002449881.1 | 50S ribosomal protein L33 | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36866.84 Da Isoelectric Point: 8.4444
>NTDB_id=1095091 ACMVYP_RS09365 WP_017176236.1 1873557..1874531(-) (comGA) [Staphylococcus hominis strain YSMAS1_1_A7]
MKLLFQEIINKAISKNASDVHFIPSEDKVHIKFRVNDILETYEMFSNDIYEKLLIYMKFKANLDVSTHQIAQSGRYTYHA
KSIFYLRISTLPLSLGVESCVIRLIPQYFTSKREYKDFNDFKSLMNKKQGLILLTGPTGSGKSTLMYQLVLYAFQELNLN
VITIENPVEQLLKGITQVSVNHKAGIDYVSSFKAILRCDPDVILIGEIRDAEVAKCVIQASLSGHLVLTTMHSSNCKGAI
LRLLEMGISVQEISQAINVISNQRLVTTTSNQRKLVCESITNNQIQYFFEHNHTLPKTFNNLKEKLLSLSKEGLICEDVV
EKYI
MKLLFQEIINKAISKNASDVHFIPSEDKVHIKFRVNDILETYEMFSNDIYEKLLIYMKFKANLDVSTHQIAQSGRYTYHA
KSIFYLRISTLPLSLGVESCVIRLIPQYFTSKREYKDFNDFKSLMNKKQGLILLTGPTGSGKSTLMYQLVLYAFQELNLN
VITIENPVEQLLKGITQVSVNHKAGIDYVSSFKAILRCDPDVILIGEIRDAEVAKCVIQASLSGHLVLTTMHSSNCKGAI
LRLLEMGISVQEISQAINVISNQRLVTTTSNQRKLVCESITNNQIQYFFEHNHTLPKTFNNLKEKLLSLSKEGLICEDVV
EKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=1095091 ACMVYP_RS09365 WP_017176236.1 1873557..1874531(-) (comGA) [Staphylococcus hominis strain YSMAS1_1_A7]
TTGAAATTATTATTTCAAGAAATAATTAATAAAGCAATTTCAAAAAATGCAAGTGACGTACACTTTATTCCTTCAGAGGA
TAAAGTACATATTAAATTCAGAGTGAATGATATATTAGAGACATATGAAATGTTTAGTAATGACATTTATGAAAAATTAT
TAATTTATATGAAATTTAAAGCAAATTTAGATGTATCAACACATCAAATAGCTCAAAGTGGTAGATATACTTATCATGCT
AAATCAATATTTTATTTAAGAATTTCTACTTTACCTTTGTCATTAGGAGTAGAAAGTTGTGTTATTAGACTTATCCCTCA
ATATTTCACTTCTAAAAGAGAGTATAAGGACTTTAATGACTTTAAATCTCTAATGAATAAAAAGCAAGGTCTCATTTTAC
TTACTGGTCCAACAGGTTCAGGTAAAAGTACTTTGATGTATCAATTAGTACTCTATGCTTTTCAAGAATTAAATTTAAAT
GTTATTACAATTGAAAATCCTGTTGAACAATTATTAAAAGGCATAACACAAGTGTCAGTAAATCATAAAGCCGGTATAGA
TTATGTTAGTTCATTTAAAGCAATATTAAGATGTGATCCAGATGTTATTTTAATTGGTGAAATTAGAGATGCTGAAGTGG
CAAAATGTGTTATTCAAGCAAGTTTAAGTGGTCATTTAGTGTTAACTACTATGCATTCAAGCAATTGTAAGGGCGCAATA
CTCAGATTGTTAGAGATGGGGATTAGTGTTCAAGAAATTTCACAAGCAATAAATGTTATTTCAAATCAAAGATTAGTTAC
AACTACTTCAAATCAAAGAAAGCTTGTTTGTGAGTCTATTACAAATAATCAAATTCAATATTTTTTTGAACATAACCATA
CGCTTCCTAAGACATTTAATAATTTAAAAGAAAAATTGTTATCGCTATCGAAAGAAGGTCTTATATGTGAAGATGTGGTT
GAAAAATATATTTAA
TTGAAATTATTATTTCAAGAAATAATTAATAAAGCAATTTCAAAAAATGCAAGTGACGTACACTTTATTCCTTCAGAGGA
TAAAGTACATATTAAATTCAGAGTGAATGATATATTAGAGACATATGAAATGTTTAGTAATGACATTTATGAAAAATTAT
TAATTTATATGAAATTTAAAGCAAATTTAGATGTATCAACACATCAAATAGCTCAAAGTGGTAGATATACTTATCATGCT
AAATCAATATTTTATTTAAGAATTTCTACTTTACCTTTGTCATTAGGAGTAGAAAGTTGTGTTATTAGACTTATCCCTCA
ATATTTCACTTCTAAAAGAGAGTATAAGGACTTTAATGACTTTAAATCTCTAATGAATAAAAAGCAAGGTCTCATTTTAC
TTACTGGTCCAACAGGTTCAGGTAAAAGTACTTTGATGTATCAATTAGTACTCTATGCTTTTCAAGAATTAAATTTAAAT
GTTATTACAATTGAAAATCCTGTTGAACAATTATTAAAAGGCATAACACAAGTGTCAGTAAATCATAAAGCCGGTATAGA
TTATGTTAGTTCATTTAAAGCAATATTAAGATGTGATCCAGATGTTATTTTAATTGGTGAAATTAGAGATGCTGAAGTGG
CAAAATGTGTTATTCAAGCAAGTTTAAGTGGTCATTTAGTGTTAACTACTATGCATTCAAGCAATTGTAAGGGCGCAATA
CTCAGATTGTTAGAGATGGGGATTAGTGTTCAAGAAATTTCACAAGCAATAAATGTTATTTCAAATCAAAGATTAGTTAC
AACTACTTCAAATCAAAGAAAGCTTGTTTGTGAGTCTATTACAAATAATCAAATTCAATATTTTTTTGAACATAACCATA
CGCTTCCTAAGACATTTAATAATTTAAAAGAAAAATTGTTATCGCTATCGAAAGAAGGTCTTATATGTGAAGATGTGGTT
GAAAAATATATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
69.136 |
100 |
0.691 |
| comGA | Staphylococcus aureus N315 |
69.136 |
100 |
0.691 |