Detailed information NTG1094995

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ACLCDX_RS16965
• Genome accession: NZ_CP180263
• Coordinates: 3284922..3286097 (-)
• Length: 391 a.a.
• NCBI ID: WP_060698460.1
• Uniprot ID: -
• Organism: Bacillus safensis strain BS22LVI
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3279922..3291097

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLCDX_RS16945 (ACLCDX_16945)	-	3280911..3282023 (-)	1113	WP_254965306.1	nucleotidyltransferase family protein	-
ACLCDX_RS16950 (ACLCDX_16950)	-	3282020..3282322 (-)	303	WP_254965304.1	Dabb family protein	-
ACLCDX_RS16955 (ACLCDX_16955)	-	3283111..3283953 (-)	843	WP_254965302.1	DegV family protein	-
ACLCDX_RS16960 (ACLCDX_16960)	degU	3284168..3284857 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
ACLCDX_RS16965 (ACLCDX_16965)	degS	3284922..3286097 (-)	1176	WP_060698460.1	sensor histidine kinase	Regulator
ACLCDX_RS16970 (ACLCDX_16970)	-	3286317..3286985 (+)	669	WP_012011434.1	YigZ family protein	-
ACLCDX_RS16975 (ACLCDX_16975)	-	3286970..3288061 (+)	1092	WP_254965290.1	LCP family protein	-
ACLCDX_RS16980 (ACLCDX_16980)	-	3288097..3289164 (-)	1068	WP_335343460.1	MraY family glycosyltransferase	-
ACLCDX_RS16985 (ACLCDX_16985)	tuaH	3289299..3290495 (-)	1197	WP_311165397.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45509.22 Da
• Isoelectric Point: 5.8757

>NTDB_id=1094995 ACLCDX_RS16965 WP_060698460.1 3284922..3286097(-) (degS) [Bacillus safensis strain BS22LVI]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLSLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=1094995 ACLCDX_RS16965 WP_060698460.1 3284922..3286097(-) (degS) [Bacillus safensis strain BS22LVI]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATCAAGCAGCAAG
TAAACGAAGTAATTGATTTTGGGGACAAGCTGGAAGTCCATACAAGACATGCTAGAAATCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTTACCATGAT
CCAGCAGCGTGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTATTAAGCTTACAAGACGTCATTGAGC
GTTCTGAAACGCTTGTGAGTCAGATTACAGTGGTTCTCAACTATCTCAACCAGGATTTACGCCAGGTCGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGGCTGAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGAATTTTTAGAGACCGCG
GTACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGGAATGCACTGTACGAAGTGAGAAGAATAATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTTTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGGAAAACCAAAATTACGTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTAGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAGCATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTTATCATGATTCGCGTGCCATTATCATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterProScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.714	98.465	0.844