Detailed information NTG1094504

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: ACMVO4_RS02715
• Genome accession: NZ_CP180205
• Coordinates: 539530..542916 (-)
• Length: 1128 a.a.
• NCBI ID: WP_414931902.1
• Uniprot ID: -
• Organism: Vibrio europaeus strain EX1
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 534530..547916

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMVO4_RS02700 (ACMVO4_02700)	-	535007..536032 (-)	1026	WP_171382799.1	ABC transporter permease	-
ACMVO4_RS02705 (ACMVO4_02705)	-	536035..537021 (-)	987	WP_171382800.1	ABC transporter permease	-
ACMVO4_RS02710 (ACMVO4_02710)	-	537194..538876 (-)	1683	WP_069667555.1	ABC transporter substrate-binding protein	-
ACMVO4_RS02715 (ACMVO4_02715)	chiS	539530..542916 (-)	3387	WP_414931902.1	response regulator	Regulator
ACMVO4_RS02720 (ACMVO4_02720)	rsmC	543126..544148 (-)	1023	WP_414931903.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
ACMVO4_RS02725 (ACMVO4_02725)	-	544243..545328 (-)	1086	WP_069667552.1	AI-2E family transporter	-
ACMVO4_RS02730 (ACMVO4_02730)	hemL	545592..546884 (-)	1293	WP_069667551.1	glutamate-1-semialdehyde 2,1-aminomutase	-
ACMVO4_RS02735 (ACMVO4_02735)	erpA	547136..547477 (+)	342	WP_004742653.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127115.36 Da
• Isoelectric Point: 5.6571

>NTDB_id=1094504 ACMVO4_RS02715 WP_414931902.1 539530..542916(-) (chiS) [Vibrio europaeus strain EX1]
MFKFYRKQKFKRLQSTLMLAFLVLSITPLTVIAIFFLQSHTQDLQEQSTSHLTSVRDSKRQQVIDYLYAKESEVMGFVRS
ELAYASGGRFYGLVNAFSSLGLDIEQAREYAQRRYIQGSGDQIKTSILPQSSVYNGTERYRLLHKRYHWAYLELLKRSDF
DDILLVDREGNVTYSIYKHDNFGTNLLTGKYKDDNLGKTFAKLRNLVNDKRKTNEDFTPLIISDFSSEQGKPVAWLGAPI
IQQGYLHSYAMFRLPNNGITKLVADKSNLVSMKTLLVGSDHQSRTLAYQQEDIDKSRQVVDLALAGASDVGTYTNTENEA
IIAAYSPISFKGIDWAIVVEVPESVAFARVHQLETLFIFAMLTAILLVVMASHYLSNFITSPLLQLTWAAEKVSAGDLDA
DMNNTQRKDEIGRLAISFERMQRSIREKILLIKQQNEELESNLQLIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALASGANGPITSEHKYQLDIIINSGQRLATLVDDLLDYHKMRYGNLDIETSAVDLSGSTRLVLELSSHLIGSKPLRI
INQVPDEPVWVSADPQRLEQVLYNLVGNAIKYTSEGKIVISASVVDDNIRVQVVDTGQGIPADQLDHIFEPLIQAGSDAS
RYRQGAGLGLSISRQLIELMQGTLYVSSQPMVGTTFSFTLPIANTEQIEQANHYESAHFRAPNSGEIELEEPASLPENPD
GPLLLVVDDEPVNLRVLDSFLRLEGYRVRTAKDGHEALETIGKEKPELLLLDIMMPGMSGYQVCETLRETYDHAQLPVIM
LTALNQTDDRVRGFNAGANDYLSKPFNKQELAARIVAHLTASKAEQRRIENQQLHQELKHRAIVEASLLETQGRLLEQLE
TAPEAIVCVREDNKIRFANEAASRLFKRSTEQLKRSSADEIIAPKFLNVEQEHYCGTIDVYVEDVRQHLSADILKLPEGA
GLRSMYIFNVGGGINAARINNLETAIEALSSFAFEGDKAKLQELKELGGEFTRLADRATSDNKSKQEVMREVLVEAMTNA
LIYWESVTGQTKFAFAEQSGLWRVYLDRSTLQTRTLDKYLRPETLPKTPRWRTVLSSLDYILEHCNEQSPERTHIEGLRD
KLQHLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=1094504 ACMVO4_RS02715 WP_414931902.1 539530..542916(-) (chiS) [Vibrio europaeus strain EX1]
ATGTTTAAGTTTTATCGAAAACAGAAGTTTAAACGCCTTCAGAGTACCTTAATGCTGGCATTTTTAGTGTTGAGTATTAC
CCCTCTGACGGTTATTGCGATCTTTTTCTTACAGTCCCACACTCAAGATCTTCAAGAGCAAAGTACCTCACACCTAACCT
CGGTTCGAGATAGTAAGCGCCAACAAGTAATCGATTACTTATACGCCAAGGAATCTGAGGTAATGGGCTTCGTCCGTTCG
GAATTAGCCTATGCAAGTGGCGGACGTTTCTATGGGTTGGTCAACGCCTTTAGCAGCTTAGGTTTGGATATTGAGCAAGC
TCGTGAGTACGCTCAGCGTCGTTATATCCAAGGTTCAGGCGACCAAATTAAAACCTCAATATTACCTCAGTCGAGTGTCT
ATAACGGCACAGAACGCTACCGCTTACTCCACAAACGTTATCACTGGGCATATCTAGAGCTTTTAAAGCGCTCTGATTTT
GATGACATTCTACTTGTCGATAGAGAAGGTAATGTCACTTACTCGATCTACAAGCATGATAACTTTGGTACTAACCTGCT
GACGGGTAAATACAAAGACGATAACTTAGGTAAAACCTTCGCTAAGCTGCGTAATCTGGTTAACGATAAACGCAAAACCA
ATGAAGATTTTACCCCTCTGATTATTTCTGACTTCTCTAGCGAGCAAGGAAAACCCGTAGCTTGGCTTGGTGCCCCTATA
ATCCAGCAAGGCTATTTGCACAGTTATGCGATGTTTAGGTTGCCAAACAATGGCATCACCAAACTGGTCGCCGACAAGAG
TAATCTGGTGTCTATGAAAACACTACTAGTCGGCTCCGATCATCAATCACGCACCCTTGCCTACCAACAAGAAGATATTG
ATAAAAGTCGCCAAGTGGTCGACCTTGCGCTTGCAGGCGCAAGCGACGTAGGCACTTATACCAACACGGAAAATGAAGCG
ATTATTGCCGCTTACAGCCCAATTTCCTTTAAAGGTATTGACTGGGCCATTGTAGTAGAAGTGCCAGAAAGCGTCGCCTT
CGCCCGTGTCCACCAGCTCGAAACCCTATTTATCTTCGCCATGCTTACTGCCATTCTATTGGTTGTCATGGCCTCGCATT
ATTTGTCGAACTTTATCACCTCACCACTGCTACAACTGACTTGGGCAGCAGAGAAAGTATCAGCTGGTGATCTTGATGCC
GACATGAACAACACTCAGCGCAAAGACGAGATTGGGCGCTTGGCGATCAGCTTCGAGCGGATGCAACGCTCCATTAGAGA
GAAGATCCTGCTGATCAAACAGCAAAATGAAGAGCTAGAAAGTAATCTTCAACTGATCCAAAAGCAAAATGAAGAACTGC
AATTGGCGAATAAACTCAAAGATGAGTTCTTGGCCACCACTTCCCATGAGCTACGCACTCCACTTCATGGTATGGTCGGT
ATTGCTGAAGCTCTCGCCTCTGGCGCTAATGGCCCAATCACCTCTGAGCATAAGTATCAGCTCGATATCATCATCAATAG
TGGTCAGCGTTTAGCTACCTTGGTTGATGACCTGCTCGACTATCATAAGATGCGCTATGGCAATCTAGATATCGAGACCA
GTGCCGTCGATTTATCAGGCTCAACTCGCTTGGTGTTGGAACTCTCTTCTCACTTGATAGGCTCCAAGCCTCTGCGGATT
ATTAATCAGGTTCCTGACGAACCTGTTTGGGTTAGTGCCGATCCACAACGACTAGAGCAAGTTTTATATAACTTGGTCGG
CAATGCGATTAAATACACTAGCGAAGGAAAGATCGTTATCTCAGCCAGTGTGGTAGATGACAATATTCGCGTTCAAGTGG
TCGATACAGGGCAAGGTATCCCAGCCGATCAGCTTGACCACATCTTTGAACCTCTTATTCAAGCAGGAAGCGACGCGAGT
CGTTATCGTCAAGGAGCGGGATTGGGCTTGTCGATTAGCCGTCAGCTAATTGAACTAATGCAAGGTACGCTCTATGTCAG
CAGCCAGCCTATGGTTGGAACCACCTTTAGCTTCACGTTGCCAATCGCCAATACAGAGCAAATTGAGCAAGCAAACCATT
ATGAGTCCGCTCATTTTAGAGCGCCGAACTCCGGTGAGATTGAACTAGAGGAGCCAGCAAGCTTACCTGAAAATCCAGAC
GGCCCTCTATTACTTGTCGTCGACGACGAACCTGTAAACCTACGGGTATTGGATAGTTTCTTGCGCCTAGAAGGCTATCG
TGTTCGAACAGCGAAAGATGGCCATGAGGCGCTGGAAACCATCGGTAAGGAAAAACCTGAGCTGCTGCTACTGGATATCA
TGATGCCGGGAATGAGTGGTTACCAAGTGTGTGAAACTCTACGCGAGACCTACGATCATGCACAACTACCCGTGATCATG
CTAACTGCTTTAAACCAAACTGATGATCGGGTACGCGGCTTTAACGCGGGTGCCAACGACTACCTATCCAAGCCATTTAA
CAAGCAAGAGCTAGCGGCGCGCATCGTCGCTCATCTCACCGCTAGCAAAGCGGAACAGCGTCGAATCGAAAATCAACAAC
TGCATCAAGAGCTAAAACATCGGGCGATCGTCGAAGCAAGTTTACTTGAGACACAAGGCCGACTACTTGAGCAACTTGAG
ACCGCTCCAGAGGCCATTGTCTGCGTACGGGAAGATAATAAGATTCGCTTCGCTAACGAGGCGGCATCAAGACTGTTTAA
ACGCTCAACCGAACAGCTTAAACGTTCAAGCGCAGACGAAATCATTGCGCCTAAGTTCCTTAACGTGGAACAGGAACACT
ACTGCGGCACTATTGATGTCTATGTAGAAGATGTAAGGCAGCACCTGTCGGCAGATATCCTCAAGCTGCCTGAAGGAGCC
GGACTGCGCTCTATGTACATCTTTAACGTCGGTGGTGGAATCAATGCGGCGCGTATTAACAACCTAGAGACCGCAATTGA
GGCATTATCTAGCTTCGCTTTTGAAGGGGATAAAGCCAAACTGCAAGAGCTTAAAGAACTAGGCGGAGAATTTACTCGCT
TGGCAGACAGAGCAACAAGCGACAACAAGTCAAAACAAGAGGTGATGCGCGAAGTATTGGTAGAAGCGATGACTAACGCG
CTTATTTATTGGGAATCGGTTACAGGCCAAACTAAGTTTGCTTTTGCTGAGCAAAGCGGTTTATGGCGCGTGTATCTCGA
CCGAAGCACATTGCAAACCCGCACCTTGGACAAGTACCTCCGACCGGAAACCCTCCCGAAGACTCCGCGTTGGAGAACCG
TATTAAGCTCTCTCGATTACATTCTTGAGCACTGCAATGAACAAAGTCCAGAGAGAACCCACATAGAAGGGTTACGCGAT
AAATTGCAGCATTTACTCACTAGCTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (725-835)

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-682)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	79.433	100	0.794