Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACK8DC_RS08840 | Genome accession | NZ_CP179883 |
| Coordinates | 1859768..1860148 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain MRSN15091 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1854768..1865148
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACK8DC_RS08810 (ACK8DC_08810) | kdsB | 1855671..1856432 (+) | 762 | WP_000680696.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ACK8DC_RS08815 (ACK8DC_08815) | - | 1856444..1857424 (+) | 981 | WP_004747384.1 | DNA polymerase III, delta' subunit | - |
| ACK8DC_RS08820 (ACK8DC_08820) | - | 1857436..1857777 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACK8DC_RS08825 (ACK8DC_08825) | - | 1857795..1858568 (+) | 774 | WP_000497302.1 | TatD family hydrolase | - |
| ACK8DC_RS08830 (ACK8DC_08830) | - | 1858606..1859214 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACK8DC_RS08835 (ACK8DC_08835) | - | 1859224..1859778 (+) | 555 | WP_000841371.1 | type II secretion system protein | - |
| ACK8DC_RS08840 (ACK8DC_08840) | xcpV | 1859768..1860148 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACK8DC_RS08845 (ACK8DC_08845) | xcpW | 1860148..1860849 (+) | 702 | WP_004747380.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACK8DC_RS08850 (ACK8DC_08850) | gspK | 1860849..1861808 (+) | 960 | WP_004747379.1 | type II secretion system minor pseudopilin GspK | - |
| ACK8DC_RS08855 (ACK8DC_08855) | - | 1862038..1862634 (+) | 597 | WP_000908453.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| ACK8DC_RS08860 (ACK8DC_08860) | ung | 1862685..1863398 (+) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| ACK8DC_RS08865 (ACK8DC_08865) | - | 1863395..1864519 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACK8DC_RS08870 (ACK8DC_08870) | tadA | 1864526..1865029 (+) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1093400 ACK8DC_RS08840 WP_000836911.1 1859768..1860148(+) (xcpV) [Acinetobacter baumannii strain MRSN15091]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1093400 ACK8DC_RS08840 WP_000836911.1 1859768..1860148(+) (xcpV) [Acinetobacter baumannii strain MRSN15091]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTTGCAGCTGTCGCTTTAACTAA
AGTTGCAATGCAGTACACTCAGTCTACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTTGCAGCTGTCGCTTTAACTAA
AGTTGCAATGCAGTACACTCAGTCTACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |