Detailed information NTG1093401

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACK8DC_RS08845
• Genome accession: NZ_CP179883
• Coordinates: 1860148..1860849 (+)
• Length: 233 a.a.
• NCBI ID: WP_004747380.1
• Uniprot ID: A0A9E9PDK8
• Organism: Acinetobacter baumannii strain MRSN15091
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1855148..1865849

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK8DC_RS08810 (ACK8DC_08810)	kdsB	1855671..1856432 (+)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACK8DC_RS08815 (ACK8DC_08815)	-	1856444..1857424 (+)	981	WP_004747384.1	DNA polymerase III, delta' subunit	-
ACK8DC_RS08820 (ACK8DC_08820)	-	1857436..1857777 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
ACK8DC_RS08825 (ACK8DC_08825)	-	1857795..1858568 (+)	774	WP_000497302.1	TatD family hydrolase	-
ACK8DC_RS08830 (ACK8DC_08830)	-	1858606..1859214 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACK8DC_RS08835 (ACK8DC_08835)	-	1859224..1859778 (+)	555	WP_000841371.1	type II secretion system protein	-
ACK8DC_RS08840 (ACK8DC_08840)	xcpV	1859768..1860148 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACK8DC_RS08845 (ACK8DC_08845)	xcpW	1860148..1860849 (+)	702	WP_004747380.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACK8DC_RS08850 (ACK8DC_08850)	gspK	1860849..1861808 (+)	960	WP_004747379.1	type II secretion system minor pseudopilin GspK	-
ACK8DC_RS08855 (ACK8DC_08855)	-	1862038..1862634 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
ACK8DC_RS08860 (ACK8DC_08860)	ung	1862685..1863398 (+)	714	WP_001177527.1	uracil-DNA glycosylase	-
ACK8DC_RS08865 (ACK8DC_08865)	-	1863395..1864519 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACK8DC_RS08870 (ACK8DC_08870)	tadA	1864526..1865029 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
ACK8DC_RS08875 (ACK8DC_08875)	-	1865099..1865542 (+)	444	WP_004747375.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26629.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=1093401 ACK8DC_RS08845 WP_004747380.1 1860148..1860849(+) (xcpW) [Acinetobacter baumannii strain MRSN15091]
MIKNKYIHIRSFASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1093401 ACK8DC_RS08845 WP_004747380.1 1860148..1860849(+) (xcpW) [Acinetobacter baumannii strain MRSN15091]
ATGATAAAAAATAAATATATTCACATCCGCAGCTTTGCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTACATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996