Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | ACK8DB_RS01485 | Genome accession | NZ_CP179875 |
| Coordinates | 316950..317477 (+) | Length | 175 a.a. |
| NCBI ID | WP_024436689.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain MRSN548102 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 311950..322477
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACK8DB_RS01470 (ACK8DB_01470) | pilM | 314503..315561 (+) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
| ACK8DB_RS01475 (ACK8DB_01475) | pilN | 315561..316202 (+) | 642 | WP_000201226.1 | PilN domain-containing protein | Machinery gene |
| ACK8DB_RS01480 (ACK8DB_01480) | pilO | 316199..316939 (+) | 741 | WP_000076101.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ACK8DB_RS01485 (ACK8DB_01485) | pilP | 316950..317477 (+) | 528 | WP_024436689.1 | pilus assembly protein PilP | Machinery gene |
| ACK8DB_RS01490 (ACK8DB_01490) | - | 317540..318697 (+) | 1158 | Protein_284 | AMIN domain-containing protein | - |
| ACK8DB_RS01500 (ACK8DB_01500) | - | 319878..320897 (+) | 1020 | Protein_286 | type IV pilus secretin PilQ | - |
| ACK8DB_RS01505 (ACK8DB_01505) | aroK | 320909..321478 (+) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19433.66 Da Isoelectric Point: 8.9898
>NTDB_id=1093286 ACK8DB_RS01485 WP_024436689.1 316950..317477(+) (pilP) [Acinetobacter baumannii strain MRSN548102]
MKIKQITLYVLACAVLIGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKIKQITLYVLACAVLIGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=1093286 ACK8DB_RS01485 WP_024436689.1 316950..317477(+) (pilP) [Acinetobacter baumannii strain MRSN548102]
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTATCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCGCAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCTCTTGAAGCTTTAAATATGAAAGGGAGCATGCG
AAATAATCGAGGGCAGATATTGGCCTTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCTGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTATCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCGCAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCTCTTGAAGCTTTAAATATGAAAGGGAGCATGCG
AAATAATCGAGGGCAGATATTGGCCTTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCTGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
99.429 |
100 |
0.994 |
| comL | Acinetobacter baylyi ADP1 |
71.839 |
99.429 |
0.714 |