Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACK8DA_RS08785 | Genome accession | NZ_CP179869 |
| Coordinates | 1855381..1855761 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain MRSN122172 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1850381..1860761
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACK8DA_RS08755 (ACK8DA_08755) | kdsB | 1851284..1852045 (+) | 762 | WP_000680696.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ACK8DA_RS08760 (ACK8DA_08760) | - | 1852057..1853037 (+) | 981 | WP_004747384.1 | DNA polymerase III, delta' subunit | - |
| ACK8DA_RS08765 (ACK8DA_08765) | - | 1853049..1853390 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACK8DA_RS08770 (ACK8DA_08770) | - | 1853408..1854181 (+) | 774 | WP_000497302.1 | TatD family hydrolase | - |
| ACK8DA_RS08775 (ACK8DA_08775) | - | 1854219..1854827 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACK8DA_RS08780 (ACK8DA_08780) | - | 1854837..1855391 (+) | 555 | WP_000841371.1 | type II secretion system protein | - |
| ACK8DA_RS08785 (ACK8DA_08785) | xcpV | 1855381..1855761 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACK8DA_RS08790 (ACK8DA_08790) | xcpW | 1855761..1856462 (+) | 702 | WP_004747380.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACK8DA_RS08795 (ACK8DA_08795) | gspK | 1856462..1857421 (+) | 960 | WP_004747379.1 | type II secretion system minor pseudopilin GspK | - |
| ACK8DA_RS08800 (ACK8DA_08800) | - | 1857651..1858247 (+) | 597 | WP_000908453.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| ACK8DA_RS08805 (ACK8DA_08805) | ung | 1858298..1859011 (+) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| ACK8DA_RS08810 (ACK8DA_08810) | - | 1859008..1860132 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACK8DA_RS08815 (ACK8DA_08815) | tadA | 1860139..1860642 (+) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1093208 ACK8DA_RS08785 WP_000836911.1 1855381..1855761(+) (xcpV) [Acinetobacter baumannii strain MRSN122172]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1093208 ACK8DA_RS08785 WP_000836911.1 1855381..1855761(+) (xcpV) [Acinetobacter baumannii strain MRSN122172]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTTGCAGCTGTCGCTTTAACTAA
AGTTGCAATGCAGTACACTCAGTCTACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTTGCAGCTGTCGCTTTAACTAA
AGTTGCAATGCAGTACACTCAGTCTACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |