Detailed information NTG1093209

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACK8DA_RS08790
• Genome accession: NZ_CP179869
• Coordinates: 1855761..1856462 (+)
• Length: 233 a.a.
• NCBI ID: WP_004747380.1
• Uniprot ID: A0A9E9PDK8
• Organism: Acinetobacter baumannii strain MRSN122172
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1850761..1861462

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK8DA_RS08755 (ACK8DA_08755)	kdsB	1851284..1852045 (+)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACK8DA_RS08760 (ACK8DA_08760)	-	1852057..1853037 (+)	981	WP_004747384.1	DNA polymerase III, delta' subunit	-
ACK8DA_RS08765 (ACK8DA_08765)	-	1853049..1853390 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
ACK8DA_RS08770 (ACK8DA_08770)	-	1853408..1854181 (+)	774	WP_000497302.1	TatD family hydrolase	-
ACK8DA_RS08775 (ACK8DA_08775)	-	1854219..1854827 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACK8DA_RS08780 (ACK8DA_08780)	-	1854837..1855391 (+)	555	WP_000841371.1	type II secretion system protein	-
ACK8DA_RS08785 (ACK8DA_08785)	xcpV	1855381..1855761 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACK8DA_RS08790 (ACK8DA_08790)	xcpW	1855761..1856462 (+)	702	WP_004747380.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACK8DA_RS08795 (ACK8DA_08795)	gspK	1856462..1857421 (+)	960	WP_004747379.1	type II secretion system minor pseudopilin GspK	-
ACK8DA_RS08800 (ACK8DA_08800)	-	1857651..1858247 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
ACK8DA_RS08805 (ACK8DA_08805)	ung	1858298..1859011 (+)	714	WP_001177527.1	uracil-DNA glycosylase	-
ACK8DA_RS08810 (ACK8DA_08810)	-	1859008..1860132 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACK8DA_RS08815 (ACK8DA_08815)	tadA	1860139..1860642 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
ACK8DA_RS08820 (ACK8DA_08820)	-	1860712..1861155 (+)	444	WP_004747375.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26629.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=1093209 ACK8DA_RS08790 WP_004747380.1 1855761..1856462(+) (xcpW) [Acinetobacter baumannii strain MRSN122172]
MIKNKYIHIRSFASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1093209 ACK8DA_RS08790 WP_004747380.1 1855761..1856462(+) (xcpW) [Acinetobacter baumannii strain MRSN122172]
ATGATAAAAAATAAATATATTCACATCCGCAGCTTTGCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTACATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996