Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | ACMGE6_RS09660 | Genome accession | NZ_CP179732 |
| Coordinates | 1837141..1838109 (+) | Length | 322 a.a. |
| NCBI ID | WP_414053605.1 | Uniprot ID | - |
| Organism | Macrococcus sp. 21KM1573 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1832141..1843109
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMGE6_RS09620 (ACMGE6_09620) | - | 1832186..1832752 (+) | 567 | WP_414053600.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| ACMGE6_RS09625 (ACMGE6_09625) | - | 1832749..1834173 (+) | 1425 | WP_414053601.1 | rhomboid family intramembrane serine protease | - |
| ACMGE6_RS09630 (ACMGE6_09630) | - | 1834178..1834369 (+) | 192 | WP_414046284.1 | YqgQ family protein | - |
| ACMGE6_RS09635 (ACMGE6_09635) | - | 1834366..1835337 (+) | 972 | WP_414053602.1 | ROK family glucokinase | - |
| ACMGE6_RS09640 (ACMGE6_09640) | - | 1835337..1835648 (+) | 312 | WP_414053603.1 | MTH1187 family thiamine-binding protein | - |
| ACMGE6_RS09645 (ACMGE6_09645) | - | 1835682..1835921 (-) | 240 | WP_414046287.1 | DUF2759 domain-containing protein | - |
| ACMGE6_RS09650 (ACMGE6_09650) | - | 1836014..1836643 (+) | 630 | WP_414053604.1 | MBL fold metallo-hydrolase | - |
| ACMGE6_RS09655 (ACMGE6_09655) | - | 1836680..1836928 (-) | 249 | WP_233680344.1 | DUF2626 domain-containing protein | - |
| ACMGE6_RS09660 (ACMGE6_09660) | comGA | 1837141..1838109 (+) | 969 | WP_414053605.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACMGE6_RS09665 (ACMGE6_09665) | comGB | 1838096..1839133 (+) | 1038 | WP_414053606.1 | competence type IV pilus assembly protein ComGB | - |
| ACMGE6_RS09670 (ACMGE6_09670) | comGC | 1839145..1839495 (+) | 351 | WP_414053607.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACMGE6_RS09675 (ACMGE6_09675) | - | 1839443..1839913 (+) | 471 | WP_414053608.1 | hypothetical protein | - |
| ACMGE6_RS09680 (ACMGE6_09680) | - | 1839924..1840145 (+) | 222 | WP_414053609.1 | hypothetical protein | - |
| ACMGE6_RS09685 (ACMGE6_09685) | comGF | 1840108..1840539 (+) | 432 | WP_414053610.1 | competence type IV pilus minor pilin ComGF | - |
| ACMGE6_RS09690 (ACMGE6_09690) | - | 1840720..1841226 (+) | 507 | WP_414053611.1 | shikimate kinase | - |
| ACMGE6_RS09695 (ACMGE6_09695) | gcvT | 1841360..1842445 (+) | 1086 | WP_414054851.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 322 a.a. Molecular weight: 36392.66 Da Isoelectric Point: 6.9366
>NTDB_id=1093069 ACMGE6_RS09660 WP_414053605.1 1837141..1838109(+) (comGA) [Macrococcus sp. 21KM1573]
MEKLFTSILKDAISQQASDVHFIPSQKHVLIKLRIHGDMHDYDKIAINQFEKLLSYLKFITHLDVSEKNKAQSGTLNFDL
NAIHYNVRASTLPHSVGHEACVLRIIPTNFNEKADIEDDLLHLMHKGSGLILISGPTGSGKSTLMYHLLQYAVANLSKQV
ISIEDPVEQRIEGMIQINVNAKGNITYQNSLKAILRCDPDIIMIGEIRDADTAKNVINASLSGHLVLSTLHANSCLGAIH
RLMEMGISKVELEQSVERIINQRLVNTHSGRRRVYEQLNKSECRNYLSNQSLDSYLSINNQLNKMLDNNEITLMEHERYV
TE
MEKLFTSILKDAISQQASDVHFIPSQKHVLIKLRIHGDMHDYDKIAINQFEKLLSYLKFITHLDVSEKNKAQSGTLNFDL
NAIHYNVRASTLPHSVGHEACVLRIIPTNFNEKADIEDDLLHLMHKGSGLILISGPTGSGKSTLMYHLLQYAVANLSKQV
ISIEDPVEQRIEGMIQINVNAKGNITYQNSLKAILRCDPDIIMIGEIRDADTAKNVINASLSGHLVLSTLHANSCLGAIH
RLMEMGISKVELEQSVERIINQRLVNTHSGRRRVYEQLNKSECRNYLSNQSLDSYLSINNQLNKMLDNNEITLMEHERYV
TE
Nucleotide
Download Length: 969 bp
>NTDB_id=1093069 ACMGE6_RS09660 WP_414053605.1 1837141..1838109(+) (comGA) [Macrococcus sp. 21KM1573]
ATGGAAAAACTATTTACTTCAATATTAAAAGATGCAATATCACAACAAGCCTCAGATGTTCACTTTATACCCAGTCAAAA
GCATGTATTAATCAAATTACGAATCCATGGTGATATGCATGATTATGACAAAATAGCTATCAATCAATTTGAAAAATTAT
TGTCTTATCTAAAGTTTATCACCCACCTTGATGTTTCTGAAAAAAATAAAGCACAAAGCGGAACCCTGAATTTTGATTTA
AATGCTATTCATTATAATGTGCGTGCTTCTACATTACCTCATTCGGTAGGTCATGAAGCATGTGTTTTAAGGATAATTCC
TACCAATTTTAATGAAAAAGCAGATATTGAAGATGATTTATTACATTTAATGCATAAAGGTAGTGGTCTCATTTTAATAA
GTGGACCAACGGGTAGTGGTAAGAGTACATTAATGTATCATCTGCTTCAATATGCAGTTGCAAATTTAAGTAAACAAGTG
ATATCGATAGAGGATCCTGTTGAACAAAGGATTGAAGGTATGATACAAATTAACGTCAACGCAAAAGGGAATATCACCTA
TCAGAATTCGCTCAAAGCAATATTAAGATGTGATCCGGATATTATTATGATTGGCGAAATAAGGGACGCAGATACGGCTA
AAAATGTAATCAATGCGAGTTTAAGTGGCCATCTAGTATTATCGACACTACATGCAAATTCCTGTTTAGGGGCAATACAT
CGATTGATGGAAATGGGCATCTCAAAAGTTGAACTTGAACAGAGTGTTGAAAGAATAATAAATCAAAGATTAGTAAACAC
TCATTCTGGTAGAAGACGTGTTTACGAACAACTAAATAAGAGCGAATGTCGCAATTATTTATCTAATCAATCATTAGATT
CATATCTCTCTATTAATAATCAATTAAATAAGATGCTTGATAATAATGAGATAACTTTAATGGAGCATGAACGTTATGTT
ACTGAGTAG
ATGGAAAAACTATTTACTTCAATATTAAAAGATGCAATATCACAACAAGCCTCAGATGTTCACTTTATACCCAGTCAAAA
GCATGTATTAATCAAATTACGAATCCATGGTGATATGCATGATTATGACAAAATAGCTATCAATCAATTTGAAAAATTAT
TGTCTTATCTAAAGTTTATCACCCACCTTGATGTTTCTGAAAAAAATAAAGCACAAAGCGGAACCCTGAATTTTGATTTA
AATGCTATTCATTATAATGTGCGTGCTTCTACATTACCTCATTCGGTAGGTCATGAAGCATGTGTTTTAAGGATAATTCC
TACCAATTTTAATGAAAAAGCAGATATTGAAGATGATTTATTACATTTAATGCATAAAGGTAGTGGTCTCATTTTAATAA
GTGGACCAACGGGTAGTGGTAAGAGTACATTAATGTATCATCTGCTTCAATATGCAGTTGCAAATTTAAGTAAACAAGTG
ATATCGATAGAGGATCCTGTTGAACAAAGGATTGAAGGTATGATACAAATTAACGTCAACGCAAAAGGGAATATCACCTA
TCAGAATTCGCTCAAAGCAATATTAAGATGTGATCCGGATATTATTATGATTGGCGAAATAAGGGACGCAGATACGGCTA
AAAATGTAATCAATGCGAGTTTAAGTGGCCATCTAGTATTATCGACACTACATGCAAATTCCTGTTTAGGGGCAATACAT
CGATTGATGGAAATGGGCATCTCAAAAGTTGAACTTGAACAGAGTGTTGAAAGAATAATAAATCAAAGATTAGTAAACAC
TCATTCTGGTAGAAGACGTGTTTACGAACAACTAAATAAGAGCGAATGTCGCAATTATTTATCTAATCAATCATTAGATT
CATATCTCTCTATTAATAATCAATTAAATAAGATGCTTGATAATAATGAGATAACTTTAATGGAGCATGAACGTTATGTT
ACTGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
51.077 |
100 |
0.516 |
| comGA | Staphylococcus aureus N315 |
51.077 |
100 |
0.516 |