Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | ACMGE9_RS11655 | Genome accession | NZ_CP179727 |
| Coordinates | 2206135..2207103 (+) | Length | 322 a.a. |
| NCBI ID | WP_414042932.1 | Uniprot ID | - |
| Organism | Macrococcus sp. EM39E | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2201135..2212103
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMGE9_RS11615 (ACMGE9_11615) | - | 2201170..2201736 (+) | 567 | WP_414042925.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| ACMGE9_RS11620 (ACMGE9_11620) | - | 2201733..2203157 (+) | 1425 | WP_414042926.1 | rhomboid family intramembrane serine protease | - |
| ACMGE9_RS11625 (ACMGE9_11625) | - | 2203162..2203353 (+) | 192 | WP_414042927.1 | YqgQ family protein | - |
| ACMGE9_RS11630 (ACMGE9_11630) | - | 2203350..2204321 (+) | 972 | WP_414042928.1 | ROK family glucokinase | - |
| ACMGE9_RS11635 (ACMGE9_11635) | - | 2204321..2204632 (+) | 312 | WP_414042929.1 | MTH1187 family thiamine-binding protein | - |
| ACMGE9_RS11640 (ACMGE9_11640) | - | 2204675..2204914 (-) | 240 | WP_414042930.1 | DUF2759 domain-containing protein | - |
| ACMGE9_RS11645 (ACMGE9_11645) | - | 2205007..2205636 (+) | 630 | WP_414042931.1 | MBL fold metallo-hydrolase | - |
| ACMGE9_RS11650 (ACMGE9_11650) | - | 2205675..2205923 (-) | 249 | WP_099578437.1 | DUF2626 domain-containing protein | - |
| ACMGE9_RS11655 (ACMGE9_11655) | comGA | 2206135..2207103 (+) | 969 | WP_414042932.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACMGE9_RS11660 (ACMGE9_11660) | comGB | 2207090..2208127 (+) | 1038 | WP_414042933.1 | competence type IV pilus assembly protein ComGB | - |
| ACMGE9_RS11665 (ACMGE9_11665) | comGC | 2208139..2208498 (+) | 360 | WP_414042934.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACMGE9_RS11670 (ACMGE9_11670) | - | 2208446..2208916 (+) | 471 | WP_414042935.1 | hypothetical protein | - |
| ACMGE9_RS11675 (ACMGE9_11675) | - | 2208903..2209148 (+) | 246 | WP_414042936.1 | hypothetical protein | - |
| ACMGE9_RS11680 (ACMGE9_11680) | comGF | 2209093..2209542 (+) | 450 | WP_414042937.1 | competence type IV pilus minor pilin ComGF | - |
| ACMGE9_RS11685 (ACMGE9_11685) | - | 2209723..2210229 (+) | 507 | WP_414042938.1 | shikimate kinase | - |
| ACMGE9_RS11690 (ACMGE9_11690) | gcvT | 2210367..2211452 (+) | 1086 | WP_414044501.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 322 a.a. Molecular weight: 36556.27 Da Isoelectric Point: 6.1229
>NTDB_id=1092973 ACMGE9_RS11655 WP_414042932.1 2206135..2207103(+) (comGA) [Macrococcus sp. EM39E]
MEKTLHILLDDAIECNASDIHFIPGNECVLIKMRIHGDMHDYDTMKVDVFEKLLSYLKFVTHLDVSEKNKAQSGILSYKS
ETMSYNVRTSTLPQSVGHEACVLRMIPSVFKQTIQIEQDLLSLMHKGSGLILISGPTGSGKSTLMYQMLQYAVQHLNKQI
ISIEDPVEQRIEGMVQINVNMKANITYQNSLKAILRCDPDIIMIGEIRDPDTAKNVVNASLSGHLVLTTIHANTCIGALH
RLLEMGVTKVELEQSIEIILNQRLINTSIARKRVYEQMNKKETRLYLNDEDINSYVPISQQLSSMLENNLITQMEYERYA
VE
MEKTLHILLDDAIECNASDIHFIPGNECVLIKMRIHGDMHDYDTMKVDVFEKLLSYLKFVTHLDVSEKNKAQSGILSYKS
ETMSYNVRTSTLPQSVGHEACVLRMIPSVFKQTIQIEQDLLSLMHKGSGLILISGPTGSGKSTLMYQMLQYAVQHLNKQI
ISIEDPVEQRIEGMVQINVNMKANITYQNSLKAILRCDPDIIMIGEIRDPDTAKNVVNASLSGHLVLTTIHANTCIGALH
RLLEMGVTKVELEQSIEIILNQRLINTSIARKRVYEQMNKKETRLYLNDEDINSYVPISQQLSSMLENNLITQMEYERYA
VE
Nucleotide
Download Length: 969 bp
>NTDB_id=1092973 ACMGE9_RS11655 WP_414042932.1 2206135..2207103(+) (comGA) [Macrococcus sp. EM39E]
ATGGAAAAAACACTACATATATTATTGGATGATGCAATAGAATGTAACGCTTCGGATATTCATTTTATACCTGGTAATGA
ATGTGTGCTTATAAAAATGCGAATACATGGAGATATGCATGACTATGACACGATGAAAGTTGATGTATTCGAGAAATTAT
TATCATATTTAAAGTTTGTAACTCATCTTGATGTTTCAGAAAAAAACAAAGCACAAAGTGGAATATTGTCGTACAAAAGT
GAAACTATGTCATACAATGTTAGAACATCAACGTTGCCACAGTCTGTCGGCCATGAAGCATGCGTGTTAAGAATGATTCC
GTCTGTATTTAAACAAACGATACAAATTGAGCAAGATTTGTTATCTCTAATGCATAAGGGGAGTGGCTTAATTTTAATCA
GTGGACCAACTGGAAGCGGGAAAAGTACGTTAATGTATCAAATGTTACAATATGCAGTACAACATTTGAATAAACAAATC
ATTTCGATTGAAGATCCTGTAGAGCAACGTATAGAAGGAATGGTTCAAATTAATGTGAATATGAAAGCAAATATTACTTA
TCAAAATTCACTAAAAGCGATATTACGTTGCGATCCAGATATTATTATGATTGGAGAAATTCGCGATCCTGACACTGCGA
AAAATGTTGTTAATGCAAGTTTAAGTGGACATTTAGTGTTAACGACCATTCATGCTAATACATGTATAGGTGCACTTCAT
CGCTTATTAGAAATGGGTGTCACGAAAGTTGAACTTGAACAAAGTATTGAAATAATACTCAATCAACGATTAATAAATAC
TAGTATTGCTCGAAAAAGAGTTTATGAACAAATGAATAAAAAAGAAACGAGACTCTATTTAAATGATGAAGACATTAATT
CGTATGTACCGATTAGTCAACAGCTATCCTCAATGCTGGAAAATAATTTGATAACTCAGATGGAGTATGAACGTTATGCT
GTGGAGTAA
ATGGAAAAAACACTACATATATTATTGGATGATGCAATAGAATGTAACGCTTCGGATATTCATTTTATACCTGGTAATGA
ATGTGTGCTTATAAAAATGCGAATACATGGAGATATGCATGACTATGACACGATGAAAGTTGATGTATTCGAGAAATTAT
TATCATATTTAAAGTTTGTAACTCATCTTGATGTTTCAGAAAAAAACAAAGCACAAAGTGGAATATTGTCGTACAAAAGT
GAAACTATGTCATACAATGTTAGAACATCAACGTTGCCACAGTCTGTCGGCCATGAAGCATGCGTGTTAAGAATGATTCC
GTCTGTATTTAAACAAACGATACAAATTGAGCAAGATTTGTTATCTCTAATGCATAAGGGGAGTGGCTTAATTTTAATCA
GTGGACCAACTGGAAGCGGGAAAAGTACGTTAATGTATCAAATGTTACAATATGCAGTACAACATTTGAATAAACAAATC
ATTTCGATTGAAGATCCTGTAGAGCAACGTATAGAAGGAATGGTTCAAATTAATGTGAATATGAAAGCAAATATTACTTA
TCAAAATTCACTAAAAGCGATATTACGTTGCGATCCAGATATTATTATGATTGGAGAAATTCGCGATCCTGACACTGCGA
AAAATGTTGTTAATGCAAGTTTAAGTGGACATTTAGTGTTAACGACCATTCATGCTAATACATGTATAGGTGCACTTCAT
CGCTTATTAGAAATGGGTGTCACGAAAGTTGAACTTGAACAAAGTATTGAAATAATACTCAATCAACGATTAATAAATAC
TAGTATTGCTCGAAAAAGAGTTTATGAACAAATGAATAAAAAAGAAACGAGACTCTATTTAAATGATGAAGACATTAATT
CGTATGTACCGATTAGTCAACAGCTATCCTCAATGCTGGAAAATAATTTGATAACTCAGATGGAGTATGAACGTTATGCT
GTGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
49.371 |
98.758 |
0.488 |
| comGA | Staphylococcus aureus N315 |
49.371 |
98.758 |
0.488 |