Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACMFG9_RS10805 | Genome accession | NZ_CP179702 |
| Coordinates | 2255635..2256015 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain PR4 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2250635..2261015
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMFG9_RS10775 (ACMFG9_10775) | tadA | 2250753..2251256 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| ACMFG9_RS10780 (ACMFG9_10780) | - | 2251263..2252387 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACMFG9_RS10785 (ACMFG9_10785) | ung | 2252384..2253097 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ACMFG9_RS10790 (ACMFG9_10790) | - | 2253148..2253744 (-) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| ACMFG9_RS10795 (ACMFG9_10795) | gspK | 2253975..2254934 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| ACMFG9_RS10800 (ACMFG9_10800) | xcpW | 2254934..2255635 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACMFG9_RS10805 (ACMFG9_10805) | xcpV | 2255635..2256015 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACMFG9_RS10810 (ACMFG9_10810) | - | 2256005..2256559 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ACMFG9_RS10815 (ACMFG9_10815) | - | 2256569..2257177 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACMFG9_RS10820 (ACMFG9_10820) | - | 2257215..2257988 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ACMFG9_RS10825 (ACMFG9_10825) | - | 2258006..2258347 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACMFG9_RS10830 (ACMFG9_10830) | - | 2258359..2259339 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| ACMFG9_RS10835 (ACMFG9_10835) | kdsB | 2259351..2260112 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1092643 ACMFG9_RS10805 WP_000836911.1 2255635..2256015(-) (xcpV) [Acinetobacter baumannii strain PR4]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1092643 ACMFG9_RS10805 WP_000836911.1 2255635..2256015(-) (xcpV) [Acinetobacter baumannii strain PR4]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |