Detailed information NTG1092642

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACMFG9_RS10800
• Genome accession: NZ_CP179702
• Coordinates: 2254934..2255635 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain PR4
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2249934..2260635

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMFG9_RS10770 (ACMFG9_10770)	-	2250240..2250683 (-)	444	WP_001246675.1	SRPBCC family protein	-
ACMFG9_RS10775 (ACMFG9_10775)	tadA	2250753..2251256 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ACMFG9_RS10780 (ACMFG9_10780)	-	2251263..2252387 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACMFG9_RS10785 (ACMFG9_10785)	ung	2252384..2253097 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
ACMFG9_RS10790 (ACMFG9_10790)	-	2253148..2253744 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
ACMFG9_RS10795 (ACMFG9_10795)	gspK	2253975..2254934 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ACMFG9_RS10800 (ACMFG9_10800)	xcpW	2254934..2255635 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACMFG9_RS10805 (ACMFG9_10805)	xcpV	2255635..2256015 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACMFG9_RS10810 (ACMFG9_10810)	-	2256005..2256559 (-)	555	WP_000841373.1	type II secretion system protein	-
ACMFG9_RS10815 (ACMFG9_10815)	-	2256569..2257177 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACMFG9_RS10820 (ACMFG9_10820)	-	2257215..2257988 (-)	774	WP_000497298.1	TatD family hydrolase	-
ACMFG9_RS10825 (ACMFG9_10825)	-	2258006..2258347 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
ACMFG9_RS10830 (ACMFG9_10830)	-	2258359..2259339 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ACMFG9_RS10835 (ACMFG9_10835)	kdsB	2259351..2260112 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1092642 ACMFG9_RS10800 WP_000594589.1 2254934..2255635(-) (xcpW) [Acinetobacter baumannii strain PR4]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1092642 ACMFG9_RS10800 WP_000594589.1 2254934..2255635(-) (xcpW) [Acinetobacter baumannii strain PR4]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996